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References from BioMamba: Domain-Adaptive Biomedical Language Models. Local targets link to admitted publications; unresolved targets remain external evidence.
Biomedical question answering: A survey of approaches and challenges
10.1145/3490238 · 2021 · External reference
BioBERT: A pre-trained biomedical language representation model for biomedical text mining
10.1093/bioinformatics/btz682 · 2020 · External reference
10.18653/v1/d19-1371
10.18653/v1/d19-1371 · External reference
Domain-specific language model pretraining for biomedical natural language processing
10.1145/3458754 · 2021 · External reference
BioGPT: Generative pre-trained transformer for biomedical text generation and mining
10.1093/bib/bbac409 · 2022 · External reference
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10.18653/v1/2022.bionlp-1.9
10.18653/v1/2022.bionlp-1.9 · External reference
10.18653/v1/w19-1909
10.18653/v1/w19-1909 · External reference
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10.18653/v1/2022.findings-emnlp.398
10.18653/v1/2022.findings-emnlp.398 · External reference
10.34133/hds.0126
10.34133/hds.0126 · External reference
10.34133/hds.0196
10.34133/hds.0196 · External reference
10.34133/hds.0322
10.34133/hds.0322 · External reference
10.1038/s43588-023-00558-4
10.1038/s43588-023-00558-4 · External reference
A survey on the applications of transfer learning to enhance the performance of large language models in healthcare systems
10.1007/s44163-025-00339-0 · 2025 · External reference
A review of artificial intelligence for predicting climate driven infectious disease outbreaks to enhance global health resilience
10.1186/s12982-025-01167-4 · 2025 · External reference
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10.1093/jamia/ocae045
10.1093/jamia/ocae045 · External reference
10.18653/v1/2024.findings-acl.348
10.18653/v1/2024.findings-acl.348 · External reference
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10.18653/v1/2024.clinicalnlp-1.5
10.18653/v1/2024.clinicalnlp-1.5 · External reference
10.18653/v1/2020.acl-main.740
10.18653/v1/2020.acl-main.740 · External reference
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10.18653/v1/2022.emnlp-main.693
10.18653/v1/2022.emnlp-main.693 · External reference
10.18653/v1/2022.bigscience-1.9
10.18653/v1/2022.bigscience-1.9 · External reference
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10.18653/v1/2021.emnlp-main.98
10.18653/v1/2021.emnlp-main.98 · External reference
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MIMIC-IV, a freely accessible electronic health record dataset
10.1038/s41597-022-01899-x · 2023 · External reference
10.18653/v1/2021.naacl-main.382
10.18653/v1/2021.naacl-main.382 · External reference
A day-to-day approach for automating the hospital course section of the discharge summary
2022 · External reference
Discharge summary hospital course summarisation of in patient electronic health record text with clinical concept guided deep pre-trained transformer models
10.1016/j.jbi.2023.104358 · 2022 · External reference
A dataset and benchmark for hospital course summarization with adapted large language models
10.1093/jamia/ocae312 · 2025 · External reference
10.18653/v1/2024.bionlp-1.7
10.18653/v1/2024.bionlp-1.7 · External reference
An overview of the BIOASQ large-scale biomedical semantic indexing and question answering competition
10.1186/s12859-015-0564-6 · 2015 · External reference
BioASQ-QA: A manually curated corpus for biomedical question answering
2022 · External reference
10.1007/978-3-031-42448-9_19
10.1007/978-3-031-42448-9_19 · External reference
10.1007/978-3-030-43887-6_51
10.1007/978-3-030-43887-6_51 · 2020 · External reference
10.1007/978-3-032-04354-2_12
10.1007/978-3-032-04354-2_12 · External reference
10.18653/v1/d19-1259
10.18653/v1/d19-1259 · External reference
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2004 · External reference
10.1145/3698587.3701359
10.1145/3698587.3701359 · External reference
10.1145/3698587.3701375
10.1145/3698587.3701375 · External reference
Evaluating hospital course summarization by an electronic health record–based large language model
10.1001/jamanetworkopen.2025.26339 · 2025 · External reference
A study of generative large language model for medical research and healthcare
10.1038/s41746-023-00958-w · 2023 · External reference
Large language models encode clinical knowledge
10.1038/s41586-023-06291-2 · 2022 · External reference
Toward expert-level medical question answering with large language models
10.1038/s41591-024-03423-7 · 2025 · External reference
10.34133/hds.0221
10.34133/hds.0221 · External reference
Large language models in real-world clinical workflows: A systematic review of applications and implementation
10.3389/fdgth.2025.1659134 · 2025 · External reference
Improving large language model applications in biomedicine with retrieval-augmented generation: A systematic review, meta-analysis, and clinical development guidelines
10.1093/jamia/ocaf008 · 2025 · External reference
The evaluation illusion of large language models in medicine
10.1038/s41746-025-01963-x · 2025 · External reference
Exploring the limits of transfer learning with a unified text-to-text transformer
2019 · External reference
10.18653/v1/2022.acl-long.551
10.18653/v1/2022.acl-long.551 · External reference
A large language model for electronic health records
10.1038/s41746-022-00742-2 · 2022 · External reference
10.18653/v1/2024.findings-acl.305
10.18653/v1/2024.findings-acl.305 · External reference
10.34133/hds.0321
10.34133/hds.0321 · External reference
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Benchmarking large language models for biomedical natural language processing applications and recommendations
10.1038/s41467-025-56989-2 · 2023 · External reference
10.1038/s41551-026-01719-2
10.1038/s41551-026-01719-2 · External reference
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10.34133/hds.0176
10.34133/hds.0176 · External reference
10.34133/hds.0256
10.34133/hds.0256 · External reference
Social and behavioral determinants of health in the era of artificial intelligence with electronic health records: A scoping review
10.34133/2021/9759016 · 2021 · External reference
