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References from REGULATION OF GENE EXPRESSION IN THE GENOMIC CONTEXT. Local targets link to admitted publications; unresolved targets remain external evidence.
H3K9/HP1 and Polycomb: two key epigenetic silencing pathways for gene regulation and embryo development
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10.1016/j.ceb.2008.03.003
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Complex organizational structure of the genome revealed by genome-wide analysis of single and alternative promoters in Drosophila melanogaster
10.1186/1471-2164-10-9 · 2009 · External reference
10.1101/gr.4222606
10.1101/gr.4222606 · External reference
Synergy of human Pol II core promoter elements revealed by statistical sequence analysis
10.1093/bioinformatics/bti172 · 2005 · External reference
Comparative genomics of Drosophila and human core promoters
10.1186/gb-2006-7-7-r53 · 2006 · External reference
The features of Drosophila core promoters revealed by statistical analysis
10.1186/1471-2164-7-161 · 2006 · External reference
Unresolved reference
2006 · External reference
10.1101/gr.112466.110
10.1101/gr.112466.110 · External reference
10.1038/nmeth.1464
10.1038/nmeth.1464 · External reference
Motif composition, conservation and condition-specificity of single and alternative transcription start sites in the Drosophila genome
10.1186/gb-2009-10-7-r73 · 2009 · External reference
Core promoter structure and genomic context reflect histone 3 lysine 9 acetylation patterns
10.1186/1471-2164-11-257 · 2010 · External reference
Unresolved reference
2002 · External reference
10.1016/j.cub.2010.07.043
10.1016/j.cub.2010.07.043 · External reference
10.1073/pnas.1109873108
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10.1038/nature09158
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10.1016/j.cell.2011.01.024
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10.1146/annurev-genom-090711-163723
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10.1038/nrg2957
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Large-scale analysis of transcriptional cis-regulatory modules reveals both common features and distinct subclasses
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RNA-mediated gene activation
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10.1016/j.molcel.2012.11.021
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10.1016/j.molcel.2013.02.011
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10.1146/annurev-cellbio-101011-155824
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The role of chromatin insulators in nuclear architecture and genome function
10.1016/j.gde.2012.11.003 · 2013 · External reference
10.1242/dev.065268
10.1242/dev.065268 · External reference
10.1016/j.molcel.2013.04.018
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10.1101/gad.13.16.2098
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10.1101/gad.6.10.1865
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10.1038/sj.embor.7400334
10.1038/sj.embor.7400334 · External reference
10.1016/0092-8674(95)90008-x
10.1016/0092-8674(95)90008-x · External reference
GAGA mediates the enhancer blocking activity of the eve promoter in the Drosophila embryo
10.1101/gad.12.21.3325 · 1998 · External reference
A Drosophila protein that imparts directionality on a chromatin insulator is an enhancer of position-effect variegation
10.1016/0092-8674(95)90031-4 · 1995 · External reference
10.1016/j.molcel.2004.11.004
10.1016/j.molcel.2004.11.004 · External reference
10.1371/journal.pgen.1000814
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10.1101/gr.138156.112
10.1101/gr.138156.112 · External reference
A novel sequence-specific DNA binding protein which interacts with three regularly spaced direct repeats of the CCCTC-motif in the 5′-flanking sequence of the chicken c-myc gene
1990 · External reference
10.1016/j.cell.2009.06.001
10.1016/j.cell.2009.06.001 · External reference
10.1038/ng.857
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10.1016/j.gde.2011.01.018
10.1016/j.gde.2011.01.018 · External reference
10.1016/j.molcel.2007.09.024
10.1016/j.molcel.2007.09.024 · External reference
10.1038/sj.emboj.7601851
10.1038/sj.emboj.7601851 · External reference
10.1038/emboj.2011.406
10.1038/emboj.2011.406 · External reference
10.1093/nar/gkr737
10.1093/nar/gkr737 · External reference
TFIIIC bound DNA elements in nuclear organization and insulation
10.1016/j.bbagrm.2012.09.006 · 2013 · External reference
10.1038/emboj.2009.34
10.1038/emboj.2009.34 · External reference
10.1101/gr.136788.111
10.1101/gr.136788.111 · External reference
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10.1038/nature09990
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10.1101/gr.142125.112
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10.1016/s1097-2765(00)00101-5
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10.1016/j.molcel.2011.07.035
10.1016/j.molcel.2011.07.035 · External reference
Modular insulators: genome wide search for composite CTCF/thyroid hormone receptor binding sites
10.1371/journal.pone.0010119 · 2010 · External reference
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10.1016/j.molcel.2008.07.023
10.1016/j.molcel.2008.07.023 · External reference
10.1101/gad.924301
10.1101/gad.924301 · External reference
Enhancer-Promoter Communication at the yellow Gene of Drosophila melanogaster: Diverse Promoters Participate in and Regulate trans Interactions
10.1534/genetics.106.064121 · 2006 · External reference
Compatibility between enhancers and promoters determines the transcriptional specificity of gooseberry and gooseberry neuro in the Drosophila embryo
10.1002/j.1460-2075.1994.tb06274.x · 1994 · External reference
10.1101/gad.10.10.1260
10.1101/gad.10.10.1260 · External reference
Different core promoters possess distinct regulatory activities in the Drosophila embryo
10.1101/gad.12.4.547 · 1998 · External reference
10.1242/dev.036426
10.1242/dev.036426 · External reference
Every enhancer works with every promoter for all the combinations tested: could new regulatory pathways evolve by enhancer shuffling?
1991 · External reference
Automated high-throughput mapping of promoter-enhancer interactions in zebrafish embryos
10.1038/nmeth.1396 · 2009 · External reference
10.1101/gad.1698108
10.1101/gad.1698108 · External reference
A novel promoter-tethering element regulates enhancer-driven gene expression at the bithorax complex in the Drosophila embryo
10.1242/dev.010744 · 2008 · External reference
10.1073/pnas.142291299
10.1073/pnas.142291299 · External reference
Cis-regulatory elements of the mitotic regulator, string/Cdc25
10.1242/dev.126.9.1793 · 1999 · External reference
Molecular analysis of the zeste-white interaction reveals a promoter-proximal element essential for distant enhancer-promoter communication
10.1093/genetics/131.1.79 · 1992 · External reference
10.1007/s00412-009-0226-4
10.1007/s00412-009-0226-4 · External reference
10.1016/s0092-8674(00)81546-9
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10.1101/gad.1230004
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10.1242/dev.00227
10.1242/dev.00227 · External reference
10.1016/j.devcel.2009.12.026
10.1016/j.devcel.2009.12.026 · External reference
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10.1073/pnas.0909331106 · External reference
10.1242/dev.128.21.4339
10.1242/dev.128.21.4339 · External reference
10.1038/nrg2765
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10.1128/mcb.00461-08
10.1128/mcb.00461-08 · External reference
10.1016/j.cbpa.2012.03.022
10.1016/j.cbpa.2012.03.022 · External reference
10.1586/epr.12.61
10.1586/epr.12.61 · External reference
10.1016/j.tibtech.2013.04.004
10.1016/j.tibtech.2013.04.004 · External reference
10.1038/nmeth.2543
10.1038/nmeth.2543 · External reference
10.1038/nature12466
10.1038/nature12466 · External reference
Locus-specific editing of histone modifications at endogenous enhancers
10.1038/nbt.2701 · 2013 · External reference
Targeted DNA demethylation and activation of endogenous genes using programmable TALE-TET1 fusion proteins
2013 · External reference
FlyBase: improvements to the bibliography
10.1093/nar/gks1024 · 2013 · External reference
10.1093/nar/gkq999
10.1093/nar/gkq999 · External reference