Research graph
References from Metabolic adaptation to TCA cycle deficiency in a strictly aerobic bacterium. Local targets link to admitted publications; unresolved targets remain external evidence.
10.1016/j.pbi.2004.03.007
10.1016/j.pbi.2004.03.007 · External reference
10.1002/bies.20463
10.1002/bies.20463 · External reference
10.1016/j.cell.2018.07.013
10.1016/j.cell.2018.07.013 · External reference
Reconfiguration of the reductive TCA cycle enables high-level succinic acid production by Yarrowia lipolytica
10.1038/s41467-023-44245-4 · 2023 · External reference
10.1016/j.ymben.2025.11.003
10.1016/j.ymben.2025.11.003 · External reference
A citric acid cycle-deficient Escherichia coli as an efficient chassis for aerobic fermentations
2024 · External reference
10.1007/s00253-010-2772-3
10.1007/s00253-010-2772-3 · External reference
10.1002/bit.26281
10.1002/bit.26281 · External reference
Efficient production of trans-4-Hydroxy-l-proline from glucose by metabolic engineering of recombinant Escherichia coli
10.1111/lam.12864 · 2018 · External reference
Towards lignin consolidated bioprocessing: simultaneous lignin depolymerization and product generation by bacteria
10.1039/c5gc01165e · 2015 · External reference
Rewiring Aromatic Compound Consumption: Chromosomal Amplification and Evolution of a Foreign Pathway in Acinetobacter baylyi ADP1
10.1021/acssynbio.5c00341 · 2025 · External reference
10.1038/s41598-024-81124-4
10.1038/s41598-024-81124-4 · External reference
10.1186/s12934-019-1097-x
10.1186/s12934-019-1097-x · External reference
Engineering Acinetobacter baylyi ADP1 for mevalonate production from lignin-derived aromatic compounds
10.1016/j.mec.2021.e00173 · 2021 · External reference
A consortium-based approach to adaptive laboratory evolution of Acinetobacter baylyi ADP1 reveals novel genetic targets for lignin valorization
10.1093/jambio/lxaf138 · 2025 · External reference
Metabolic engineering of Acinetobacter baylyi ADP1 for efficient utilization of pentose sugars and production of glutamic acid
10.1016/j.ymben.2025.10.001 · 2026 · External reference
10.1016/j.ymben.2017.04.001
10.1016/j.ymben.2017.04.001 · External reference
A comprehensive metabolic map for production of bio-based chemicals
10.1038/s41929-018-0212-4 · 2019 · External reference
10.1146/annurev-micro-090817-062257
10.1146/annurev-micro-090817-062257 · External reference
10.1128/aem.01780-21
10.1128/aem.01780-21 · External reference
10.1073/pnas.1414218112
10.1073/pnas.1414218112 · External reference
Bacterial metabolic remodeling by convergent evolution unlocks nutrient availability after a host switch
10.1126/sciadv.adw9419 · 2026 · External reference
10.1128/aem.01837-14
10.1128/aem.01837-14 · External reference
TCA cycle tailoring facilitates optimal growth of proton-pumping NADH dehydrogenase-dependent Escherichia coli
2023 · External reference
Reconfiguration of metabolic fluxes in Pseudomonas putida as a response to sub-lethal oxidative stress
10.1038/s41396-020-00884-9 · 2021 · External reference
Decoupling of global metabolic flux and proteome partitioning in bacteria
10.1126/science.aeb6410 · 2026 · External reference
10.3389/fmicb.2021.733085
10.3389/fmicb.2021.733085 · External reference
QseB/QseC: a two-component system globally regulating bacterial behaviors
10.1016/j.tim.2023.02.001 · 2023 · External reference
Qse BC, a two-component bacterial adrenergic receptor and global regulator of virulence in Enterobacteriaceae and Pasteurellaceae
10.1111/omi.12138 · 2016 · External reference
10.1073/pnas.0911253107
10.1073/pnas.0911253107 · External reference
10.1038/s41598-020-73069-1
10.1038/s41598-020-73069-1 · External reference
10.1128/jb.00086-11
10.1128/jb.00086-11 · External reference
10.1261/rna.049544.115
10.1261/rna.049544.115 · External reference
10.1016/j.biotechadv.2021.107795
10.1016/j.biotechadv.2021.107795 · External reference
10.1007/978-1-4939-0554-6_12
10.1007/978-1-4939-0554-6_12 · External reference
10.1093/nar/gkh881
10.1093/nar/gkh881 · External reference
10.1038/s41596-019-0204-0
10.1038/s41596-019-0204-0 · External reference
10.1093/bioinformatics/btz209
10.1093/bioinformatics/btz209 · External reference
10.1093/bioinformatics/btr716
10.1093/bioinformatics/btr716 · External reference
fastp 1.0: An ultra-fast all-round tool for FASTQ data quality control and preprocessing
10.1002/imt2.70078 · 2025 · External reference
10.1038/nmeth.1923
10.1038/nmeth.1923 · External reference
10.1093/bioinformatics/btt656
10.1093/bioinformatics/btt656 · External reference
10.1186/s13059-014-0550-8
10.1186/s13059-014-0550-8 · External reference
10.1093/bioinformatics/bty895
10.1093/bioinformatics/bty895 · External reference
10.1002/bies.20463
10.1002/bies.20463 · ExternalCitation · doi-reference
10.1002/bit.26281
10.1002/bit.26281 · ExternalCitation · doi-reference
fastp 1.0: An ultra-fast all-round tool for FASTQ data quality control and preprocessing
10.1002/imt2.70078 · ExternalCitation · doi-reference
10.1007/978-1-4939-0554-6_12
10.1007/978-1-4939-0554-6_12 · ExternalCitation · doi-reference
10.1007/s00253-010-2772-3
10.1007/s00253-010-2772-3 · ExternalCitation · doi-reference
10.1016/j.biotechadv.2021.107795
10.1016/j.biotechadv.2021.107795 · ExternalCitation · doi-reference
10.1016/j.cell.2018.07.013
10.1016/j.cell.2018.07.013 · ExternalCitation · doi-reference
Engineering Acinetobacter baylyi ADP1 for mevalonate production from lignin-derived aromatic compounds
10.1016/j.mec.2021.e00173 · ExternalCitation · doi-reference
10.1016/j.pbi.2004.03.007
10.1016/j.pbi.2004.03.007 · ExternalCitation · doi-reference
QseB/QseC: a two-component system globally regulating bacterial behaviors
10.1016/j.tim.2023.02.001 · ExternalCitation · doi-reference
10.1016/j.ymben.2017.04.001
10.1016/j.ymben.2017.04.001 · ExternalCitation · doi-reference
Metabolic engineering of Acinetobacter baylyi ADP1 for efficient utilization of pentose sugars and production of glutamic acid
10.1016/j.ymben.2025.10.001 · ExternalCitation · doi-reference
10.1016/j.ymben.2025.11.003
10.1016/j.ymben.2025.11.003 · ExternalCitation · doi-reference
Rewiring Aromatic Compound Consumption: Chromosomal Amplification and Evolution of a Foreign Pathway in Acinetobacter baylyi ADP1
10.1021/acssynbio.5c00341 · ExternalCitation · doi-reference
10.1038/nmeth.1923
10.1038/nmeth.1923 · ExternalCitation · doi-reference
Reconfiguration of metabolic fluxes in Pseudomonas putida as a response to sub-lethal oxidative stress
10.1038/s41396-020-00884-9 · ExternalCitation · doi-reference
Reconfiguration of the reductive TCA cycle enables high-level succinic acid production by Yarrowia lipolytica
10.1038/s41467-023-44245-4 · ExternalCitation · doi-reference
10.1038/s41596-019-0204-0
10.1038/s41596-019-0204-0 · ExternalCitation · doi-reference
10.1038/s41598-020-73069-1
10.1038/s41598-020-73069-1 · ExternalCitation · doi-reference
10.1038/s41598-024-81124-4
10.1038/s41598-024-81124-4 · ExternalCitation · doi-reference
A comprehensive metabolic map for production of bio-based chemicals
10.1038/s41929-018-0212-4 · ExternalCitation · doi-reference
Towards lignin consolidated bioprocessing: simultaneous lignin depolymerization and product generation by bacteria
10.1039/c5gc01165e · ExternalCitation · doi-reference
10.1073/pnas.0911253107
10.1073/pnas.0911253107 · ExternalCitation · doi-reference
10.1073/pnas.1414218112
10.1073/pnas.1414218112 · ExternalCitation · doi-reference
10.1093/bioinformatics/btr716
10.1093/bioinformatics/btr716 · ExternalCitation · doi-reference
10.1093/bioinformatics/btt656
10.1093/bioinformatics/btt656 · ExternalCitation · doi-reference
10.1093/bioinformatics/bty895
10.1093/bioinformatics/bty895 · ExternalCitation · doi-reference
10.1093/bioinformatics/btz209
10.1093/bioinformatics/btz209 · ExternalCitation · doi-reference
A consortium-based approach to adaptive laboratory evolution of Acinetobacter baylyi ADP1 reveals novel genetic targets for lignin valorization
10.1093/jambio/lxaf138 · ExternalCitation · doi-reference
10.1093/nar/gkh881
10.1093/nar/gkh881 · ExternalCitation · doi-reference
Efficient production of trans-4-Hydroxy-l-proline from glucose by metabolic engineering of recombinant Escherichia coli
10.1111/lam.12864 · ExternalCitation · doi-reference
Qse BC, a two-component bacterial adrenergic receptor and global regulator of virulence in Enterobacteriaceae and Pasteurellaceae
10.1111/omi.12138 · ExternalCitation · doi-reference
Bacterial metabolic remodeling by convergent evolution unlocks nutrient availability after a host switch
10.1126/sciadv.adw9419 · ExternalCitation · doi-reference
Decoupling of global metabolic flux and proteome partitioning in bacteria
10.1126/science.aeb6410 · ExternalCitation · doi-reference
10.1128/aem.01780-21
10.1128/aem.01780-21 · ExternalCitation · doi-reference
10.1128/aem.01837-14
10.1128/aem.01837-14 · ExternalCitation · doi-reference
10.1128/jb.00086-11
10.1128/jb.00086-11 · ExternalCitation · doi-reference
10.1146/annurev-micro-090817-062257
10.1146/annurev-micro-090817-062257 · ExternalCitation · doi-reference
10.1186/s12934-019-1097-x
10.1186/s12934-019-1097-x · ExternalCitation · doi-reference
10.1186/s13059-014-0550-8
10.1186/s13059-014-0550-8 · ExternalCitation · doi-reference
10.1261/rna.049544.115
10.1261/rna.049544.115 · ExternalCitation · doi-reference
10.3389/fmicb.2021.733085
10.3389/fmicb.2021.733085 · ExternalCitation · doi-reference