Research graph
References from Metagenomic identification of novel <i>Hepaciviridae</i> in Australian birds reveals pegivirus recombination. Local targets link to admitted publications; unresolved targets remain external evidence.
A review of pathogen transmission at the backyard chicken-wild bird interface
10.3389/fvets.2020.539925 · 2020 · External reference
Recombination among GB virus C (GBV-C) isolates in the United States
10.1099/jgv.0.000477 · 2016 · External reference
10.1093/bioinformatics/btu170
10.1093/bioinformatics/btu170 · External reference
Organization of the flavivirus RNA replicase complex
10.1002/wrna.1437 · 2017 · External reference
Sensitive protein alignments at tree-of-life scale using DIAMOND
10.1038/s41592-021-01101-x · 2021 · External reference
10.1186/1471-2105-10-421
10.1186/1471-2105-10-421 · External reference
10.1093/bioinformatics/btp348
10.1093/bioinformatics/btp348 · External reference
Meta-transcriptomic analysis of the virome and microbiome of the invasive Indian myna (Acridotheres tristis) in Australia
10.1016/j.onehlt.2021.100360 · 2021 · External reference
10.1093/ve/veac082
10.1093/ve/veac082 · External reference
10.1093/nar/gkg563
10.1093/nar/gkg563 · External reference
10.1371/journal.ppat.1006215
10.1371/journal.ppat.1006215 · External reference
10.1093/sysbio/syq010
10.1093/sysbio/syq010 · External reference
The strange, expanding world of animal hepaciviruses
10.1146/annurev-virology-100114-055104 · 2016 · External reference
Diversity and evolution of the animal virome
10.1038/s41579-021-00665-x · 2022 · External reference
10.1093/nar/gkn785
10.1093/nar/gkn785 · External reference
10.1128/jvi.76.8.4034-4043.2002
10.1128/jvi.76.8.4034-4043.2002 · External reference
ModelFinder: Fast model selection for accurate phylogenetic estimates
10.1038/nmeth.4285 · 2017 · External reference
10.1093/bib/bbx108
10.1093/bib/bbx108 · External reference
10.1093/molbev/msl051
10.1093/molbev/msl051 · External reference
10.1093/bioinformatics/btp352
10.1093/bioinformatics/btp352 · External reference
10.1093/bioinformatics/btv033
10.1093/bioinformatics/btv033 · External reference
Detection and characterization of bovine hepacivirus in cattle and sheep from Hulunbuir, northeastern China
10.3389/fcimb.2025.1540849 · 2025 · External reference
Flightless birds
10.1016/j.cub.2022.09.039 · 2022 · External reference
10.1093/ve/veac124
10.1093/ve/veac124 · External reference
10.1093/molbev/msaa131
10.1093/molbev/msaa131 · External reference
Bats and birds as viral reservoirs: A physiological and ecological perspective
10.1016/j.scitotenv.2020.142372 · 2021 · External reference
10.64898/2026.08.08.743700
10.64898/2026.08.08.743700 · External reference
Co-infections and transmission networks of HCV, HIV-1 and HPgV among people who inject drugs
10.1038/srep15198 · 2015 · External reference
Hepatitis C and human pegivirus coinfection in patients with chronic hepatitis C from the Brazilian Amazon region: Prevalence, genotypes and clinical data
10.3390/v15091892 · 2023 · External reference
10.1016/j.meegid.2014.12.022
10.1016/j.meegid.2014.12.022 · External reference
10.1371/journal.ppat.1008759
10.1371/journal.ppat.1008759 · External reference
10.1093/ve/veaa064
10.1093/ve/veaa064 · External reference
Hepacivirus cross-species transmission and the origins of the hepatitis C virus
2016 · External reference
10.1093/nar/gkae979
10.1093/nar/gkae979 · External reference
TaxonKit: A practical and efficient NCBI taxonomy toolkit
10.1016/j.jgg.2021.03.006 · 2021 · External reference
10.1038/s41586-018-0012-7
10.1038/s41586-018-0012-7 · External reference
10.1099/jgv.0.000672
10.1099/jgv.0.000672 · External reference
Taxonomic expansion and reorganization of Flaviviridae
10.1038/s41564-025-02134-0 · 2025 · External reference
Why do RNA viruses recombine?
10.1038/nrmicro2614 · 2011 · External reference
The short-tailed shearwater: A review of it’s biology
1990 · External reference
10.3389/fimmu.2022.887760
10.3389/fimmu.2022.887760 · External reference
A metagenomic investigation into Apteryx Rowi dermatosis identifies multiple novel viruses and a highly abundant nematode
2025 · External reference
10.1099/vir.0.18660-0
10.1099/vir.0.18660-0 · External reference
10.1371/journal.ppat
10.1371/journal.ppat · External reference
10.1093/femsre/fuaa026
10.1093/femsre/fuaa026 · External reference
10.3201/eid2510.190699
10.3201/eid2510.190699 · External reference
FastQ Screen: A tool for multi-genome mapping and quality control
10.12688/f1000research.15931.1 · 2018 · External reference
10.1093/oxfordjournals.molbev.a003799
10.1093/oxfordjournals.molbev.a003799 · External reference
A novel genotype of Hepacivirus bovis identified in reindeer (Rangifer tarandus) in northeastern China
10.3389/fcimb.2025.1646191 · 2025 · External reference
Organization of the flavivirus RNA replicase complex
10.1002/wrna.1437 · ExternalCitation · doi-reference
Flightless birds
10.1016/j.cub.2022.09.039 · ExternalCitation · doi-reference
TaxonKit: A practical and efficient NCBI taxonomy toolkit
10.1016/j.jgg.2021.03.006 · ExternalCitation · doi-reference
10.1016/j.meegid.2014.12.022
10.1016/j.meegid.2014.12.022 · ExternalCitation · doi-reference
Meta-transcriptomic analysis of the virome and microbiome of the invasive Indian myna (Acridotheres tristis) in Australia
10.1016/j.onehlt.2021.100360 · ExternalCitation · doi-reference
Bats and birds as viral reservoirs: A physiological and ecological perspective
10.1016/j.scitotenv.2020.142372 · ExternalCitation · doi-reference
ModelFinder: Fast model selection for accurate phylogenetic estimates
10.1038/nmeth.4285 · ExternalCitation · doi-reference
Why do RNA viruses recombine?
10.1038/nrmicro2614 · ExternalCitation · doi-reference
Taxonomic expansion and reorganization of Flaviviridae
10.1038/s41564-025-02134-0 · ExternalCitation · doi-reference
Diversity and evolution of the animal virome
10.1038/s41579-021-00665-x · ExternalCitation · doi-reference
10.1038/s41586-018-0012-7
10.1038/s41586-018-0012-7 · ExternalCitation · doi-reference
Sensitive protein alignments at tree-of-life scale using DIAMOND
10.1038/s41592-021-01101-x · ExternalCitation · doi-reference
Co-infections and transmission networks of HCV, HIV-1 and HPgV among people who inject drugs
10.1038/srep15198 · ExternalCitation · doi-reference
10.1093/bib/bbx108
10.1093/bib/bbx108 · ExternalCitation · doi-reference
10.1093/bioinformatics/btp348
10.1093/bioinformatics/btp348 · ExternalCitation · doi-reference
10.1093/bioinformatics/btp352
10.1093/bioinformatics/btp352 · ExternalCitation · doi-reference
10.1093/bioinformatics/btu170
10.1093/bioinformatics/btu170 · ExternalCitation · doi-reference
10.1093/bioinformatics/btv033
10.1093/bioinformatics/btv033 · ExternalCitation · doi-reference
10.1093/femsre/fuaa026
10.1093/femsre/fuaa026 · ExternalCitation · doi-reference
10.1093/molbev/msaa131
10.1093/molbev/msaa131 · ExternalCitation · doi-reference
10.1093/molbev/msl051
10.1093/molbev/msl051 · ExternalCitation · doi-reference
10.1093/nar/gkae979
10.1093/nar/gkae979 · ExternalCitation · doi-reference
10.1093/nar/gkg563
10.1093/nar/gkg563 · ExternalCitation · doi-reference
10.1093/nar/gkn785
10.1093/nar/gkn785 · ExternalCitation · doi-reference
10.1093/oxfordjournals.molbev.a003799
10.1093/oxfordjournals.molbev.a003799 · ExternalCitation · doi-reference
10.1093/sysbio/syq010
10.1093/sysbio/syq010 · ExternalCitation · doi-reference
10.1093/ve/veaa064
10.1093/ve/veaa064 · ExternalCitation · doi-reference
10.1093/ve/veac082
10.1093/ve/veac082 · ExternalCitation · doi-reference
10.1093/ve/veac124
10.1093/ve/veac124 · ExternalCitation · doi-reference
Recombination among GB virus C (GBV-C) isolates in the United States
10.1099/jgv.0.000477 · ExternalCitation · doi-reference
10.1099/jgv.0.000672
10.1099/jgv.0.000672 · ExternalCitation · doi-reference
10.1099/vir.0.18660-0
10.1099/vir.0.18660-0 · ExternalCitation · doi-reference
10.1128/jvi.76.8.4034-4043.2002
10.1128/jvi.76.8.4034-4043.2002 · ExternalCitation · doi-reference
The strange, expanding world of animal hepaciviruses
10.1146/annurev-virology-100114-055104 · ExternalCitation · doi-reference
10.1186/1471-2105-10-421
10.1186/1471-2105-10-421 · ExternalCitation · doi-reference
FastQ Screen: A tool for multi-genome mapping and quality control
10.12688/f1000research.15931.1 · ExternalCitation · doi-reference
10.1371/journal.ppat
10.1371/journal.ppat · ExternalCitation · doi-reference
10.1371/journal.ppat.1006215
10.1371/journal.ppat.1006215 · ExternalCitation · doi-reference
10.1371/journal.ppat.1008759
10.1371/journal.ppat.1008759 · ExternalCitation · doi-reference
10.3201/eid2510.190699
10.3201/eid2510.190699 · ExternalCitation · doi-reference
Detection and characterization of bovine hepacivirus in cattle and sheep from Hulunbuir, northeastern China
10.3389/fcimb.2025.1540849 · ExternalCitation · doi-reference
A novel genotype of Hepacivirus bovis identified in reindeer (Rangifer tarandus) in northeastern China
10.3389/fcimb.2025.1646191 · ExternalCitation · doi-reference
10.3389/fimmu.2022.887760
10.3389/fimmu.2022.887760 · ExternalCitation · doi-reference
A review of pathogen transmission at the backyard chicken-wild bird interface
10.3389/fvets.2020.539925 · ExternalCitation · doi-reference
Hepatitis C and human pegivirus coinfection in patients with chronic hepatitis C from the Brazilian Amazon region: Prevalence, genotypes and clinical data
10.3390/v15091892 · ExternalCitation · doi-reference
10.64898/2026.08.08.743700
10.64898/2026.08.08.743700 · ExternalCitation · doi-reference
