Research graph
References from Joint recording of past and present transcriptomes reconstructs single-cell trajectories. Local targets link to admitted publications; unresolved targets remain external evidence.
10.1186/s12864-018-4772-0
10.1186/s12864-018-4772-0 · External reference
10.1093/bioinformatics/btv715
10.1093/bioinformatics/btv715 · External reference
10.1038/s41586-019-0969-x
10.1038/s41586-019-0969-x · External reference
10.1038/s41586-018-0414-6
10.1038/s41586-018-0414-6 · External reference
Paradigms, innovations, and biological applications of RNA velocity: a comprehensive review
10.1093/bib/bbaf339 · 2025 · External reference
10.1016/j.cell.2023.11.032
10.1016/j.cell.2023.11.032 · External reference
10.1038/nature25969
10.1038/nature25969 · External reference
10.1038/nbt.4124
10.1038/nbt.4124 · External reference
10.1038/nature20777
10.1038/nature20777 · External reference
10.1126/science.aaf7907
10.1126/science.aaf7907 · External reference
10.1038/s41586-022-04922-8
10.1038/s41586-022-04922-8 · External reference
10.1038/s41586-024-07706-4
10.1038/s41586-024-07706-4 · External reference
10.1038/s41587-022-01604-8
10.1038/s41587-022-01604-8 · External reference
10.1038/s41586-022-05046-9
10.1038/s41586-022-05046-9 · External reference
10.1038/s41586-019-1369-y
10.1038/s41586-019-1369-y · External reference
10.1038/s41587-020-0480-9
10.1038/s41587-020-0480-9 · External reference
A genetically encoded device for transcriptome storage in mammalian cells
10.1126/science.adz9353 · 2026 · External reference
10.1101/2025.08.12.669973
10.1101/2025.08.12.669973 · External reference
10.1038/s41587-023-01683-1
10.1038/s41587-023-01683-1 · External reference
Protocol update to: High-throughput scNMT protocol for multiomics profiling of single cells from mouse brain and pancreatic organoids
10.1016/j.xpro.2025.103980 · 2025 · External reference
10.1111/j.1440-169x.2008.01038.x
10.1111/j.1440-169x.2008.01038.x · External reference
10.1242/dev.108019
10.1242/dev.108019 · External reference
10.1101/2020.08.12.247627
10.1101/2020.08.12.247627 · External reference
10.1038/s41586-024-07898-9
10.1038/s41586-024-07898-9 · External reference
10.15252/emmm.202216434
10.15252/emmm.202216434 · External reference
10.1016/j.cell.2024.09.047
10.1016/j.cell.2024.09.047 · External reference
umite: fast quantification of Smart-seq3 libraries with improved UMI retrieval
10.1093/bioinformatics/btag075 · 2026 · External reference
10.1093/bioinformatics/bts635
10.1093/bioinformatics/bts635 · External reference
10.1038/s41587-023-01767-y
10.1038/s41587-023-01767-y · External reference
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
10.1186/s13059-014-0550-8 · 2014 · External reference
Unresolved reference
External reference
10.1093/nar/gkae097
10.1093/nar/gkae097 · External reference
Analyzing single-cell bisulfite sequencing data with MethSCAn
10.1038/s41592-024-02347-x · 2024 · External reference
10.48550/arxiv.2506.21278
10.48550/arxiv.2506.21278 · External reference
