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References from CryoCodex: learning discrete structural representations for cryo-EM map post-processing. Local targets link to admitted publications; unresolved targets remain external evidence.
10.1093/nar/gkv1126
10.1093/nar/gkv1126 · External reference
10.1016/j.str.2017.12.018
10.1016/j.str.2017.12.018 · External reference
10.1038/s41467-019-13742-w
10.1038/s41467-019-13742-w · External reference
New measures of anisotropy of cryo-EM maps
10.1038/s41592-023-01874-3 · 2023 · External reference
Merging conformational landscapes in a single consensus space with FlexConsensus algorithm
10.1038/s41592-025-02841-w · 2025 · External reference
CryoAtom improves model building for cryo-EM
10.1038/s41594-025-01713-3 · 2026 · External reference
10.65215/ltspreprints.2026.04.14.000185
10.65215/ltspreprints.2026.04.14.000185 · External reference
10.1038/s41586-024-07215-4
10.1038/s41586-024-07215-4 · External reference
EMProt improves structure determination from cryo-EM maps
10.1038/s41594-025-01723-1 · 2026 · External reference
Model building of protein complexes from intermediate-resolution cryo-EM maps with deep learning-guided automatic assembly
10.1038/s41467-022-31748-9 · 2022 · External reference
Improvement of cryo-EM maps by simultaneous local and non-local deep learning
10.1038/s41467-023-39031-1 · 2023 · External reference
10.1093/bioinformatics/btaf092
10.1093/bioinformatics/btaf092 · External reference
EMReady2: improvement of cryo-EM and cryo-ET maps by local quality-aware deep learning with Mamba
10.1038/s41467-026-71794-1 · 2026 · External reference
10.64898/2026.01.26.701621
10.64898/2026.01.26.701621 · External reference
10.1016/j.jmb.2003.07.013
10.1016/j.jmb.2003.07.013 · External reference
10.7554/elife.27131
10.7554/elife.27131 · External reference
Automated map sharpening by maximization of detail and connectivity
10.1107/s2059798318004655 · 2018 · External reference
10.1093/bioinformatics/btz671
10.1093/bioinformatics/btz671 · External reference
Improvement of cryo-EM maps by density modification
10.1038/s41592-020-0914-9 · 2020 · External reference
Local computational methods to improve the interpretability and analysis of cryo-EM maps
10.1038/s41467-021-21509-5 · 2021 · External reference
Confidence-guided cryo-EM map optimisation with LocScale-2.0
10.1038/s41467-026-75327-8 · 2026 · External reference
10.1016/j.jsb.2013.08.002
10.1016/j.jsb.2013.08.002 · External reference
Quantifying the local resolution of cryo-EM density maps
10.1038/nmeth.2727 · 2014 · External reference
10.1016/j.jmb.2023.168059
10.1016/j.jmb.2023.168059 · External reference
Unresolved reference
External reference
New tools for the analysis and validation of cryo-EM maps and atomic models
10.1107/s2059798318009324 · 2018 · External reference
Measurement of atom resolvability in cryo-EM maps with Q-scores
10.1038/s41592-020-0731-1 · 2020 · External reference
10.1002/jcc.20084
10.1002/jcc.20084 · External reference
10.1093/nar/28.1.235
10.1093/nar/28.1.235 · External reference
10.1101/2025.05.06.652459
10.1101/2025.05.06.652459 · External reference
trRosettaRNA: automated prediction of RNA 3D structure with transformer network
10.1038/s41467-023-42528-4 · 2023 · External reference
Predicting RNA structures
10.1038/s41592-025-02954-2 · 2025 · External reference
Integrated experimental and AI innovations for RNA structure determination
10.1038/s41587-025-02974-5 · 2026 · External reference
Automated detection and de novo structure modeling of nucleic acids from cryo-EM maps
10.1038/s41467-024-53721-4 · 2024 · External reference
10.1038/s41587-024-02149-8
10.1038/s41587-024-02149-8 · External reference
10.52202/079017-2694
10.52202/079017-2694 · External reference
10.1038/nbt.3988
10.1038/nbt.3988 · External reference
