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References from Integrated GWAS and transcriptome analyses reveal candidate genes associated with betalain-related pigmentation under heat stress in Amaranthus tricolor. Local targets link to admitted publications; unresolved targets remain external evidence.
Betalains, phenols and antioxidant capacity in cactus pear [Opuntia ficus-indica (L.) Mill.] fruits from Apulia (South Italy) genotypes
10.3390/antiox4020269 · 2015 · External reference
10.1093/bioinformatics/btu170
10.1093/bioinformatics/btu170 · External reference
10.1093/bioinformatics/btm308
10.1093/bioinformatics/btm308 · External reference
10.1101/2021.06.03.446934
10.1101/2021.06.03.446934 · External reference
Elucidation of the core betalain biosynthesis pathway in Amaranthus tricolor
10.1038/s41598-021-85486-x · 2021 · External reference
10.1016/j.molp.2023.09.010
10.1016/j.molp.2023.09.010 · External reference
10.1186/1471-2105-11-485
10.1186/1471-2105-11-485 · External reference
Unresolved reference
External reference
10.1126/science.aac9373
10.1126/science.aac9373 · External reference
Engineering a software tool for gene structure prediction in higher organisms
10.1016/j.infsof.2005.09.005 · 2005 · External reference
10.1007/s001220050044
10.1007/s001220050044 · External reference
10.1186/gb-2008-9-1-r7
10.1186/gb-2008-9-1-r7 · External reference
Unresolved reference
External reference
10.1038/ng.3163
10.1038/ng.3163 · External reference
10.1093/nar/27.1.297
10.1093/nar/27.1.297 · External reference
10.1016/j.scienta.2022.111428
10.1016/j.scienta.2022.111428 · External reference
10.1038/s41587-019-0201-4
10.1038/s41587-019-0201-4 · External reference
Fast gapped-read alignment with Bowtie 2
10.1038/nmeth.1923 · 2012 · External reference
PyWRKY26 and PybHLH3 cotargeted the PyMYB114 promoter to regulate anthocyanin biosynthesis and transport in red-skinned pears
10.1038/s41438-020-0254-z · 2020 · External reference
10.1093/jxb/ern072
10.1093/jxb/ern072 · External reference
10.1093/bioinformatics/btp324
10.1093/bioinformatics/btp324 · External reference
10.1093/bioinformatics/btp352
10.1093/bioinformatics/btp352 · External reference
10.3389/fpls.2023.1203089
10.3389/fpls.2023.1203089 · External reference
10.1093/jxb/erac462
10.1093/jxb/erac462 · External reference
10.1093/nar/gkz114
10.1093/nar/gkz114 · External reference
De novo SNP calling reveals the candidate genes regulating days to flowering through interspecies GWAS of Amaranthus genus
2021 · External reference
10.1371/journal.pone.0216001
10.1371/journal.pone.0216001 · External reference
10.1186/s13059-014-0550-8
10.1186/s13059-014-0550-8 · External reference
10.1093/bioinformatics/btr011
10.1093/bioinformatics/btr011 · External reference
10.1101/gr.107524.110
10.1101/gr.107524.110 · External reference
Amaranthus as a potential dietary supplement in sports nutrition
2024 · External reference
10.1270/jsbbs.19050
10.1270/jsbbs.19050 · External reference
10.1038/nbt.3122
10.1038/nbt.3122 · External reference
10.1016/j.plantsci.2011.05.009
10.1016/j.plantsci.2011.05.009 · External reference
10.1093/bioinformatics/btx494
10.1093/bioinformatics/btx494 · External reference
Impact of processing of red beet on betalain content and antioxidant activity
10.1016/j.foodres.2011.07.002 · 2013 · External reference
Identification of genetic and biochemical mechanisms associated with heat shock and heat stress adaptation in grain amaranths
10.3389/fpls.2023.1101375 · 2023 · External reference
Prospects and potentials of underutilized leafy Amaranths as vegetable use for health-promotion
10.1016/j.plaphy.2022.04.011 · 2022 · External reference
10.1093/dnares/dsw004
10.1093/dnares/dsw004 · External reference
Unresolved reference
External reference
10.1093/bioinformatics/btn013
10.1093/bioinformatics/btn013 · External reference
10.1186/s13059-014-0573-1
10.1186/s13059-014-0573-1 · External reference
10.1016/j.gpb.2021.08.005
10.1016/j.gpb.2021.08.005 · External reference
Unresolved reference
External reference
Identification of WRKY gene family members in amaranth based on a transcriptome database and functional analysis of AtrWRKY42-2 in betalain metabolism
2024 · External reference
Selection and validation of reference genes in all-red Amaranth (Amaranthus tricolor L.) seedlings under different culture conditions
10.1080/14620316.2021.1879686 · 2021 · External reference
10.1186/s12870-023-04049-6
10.1186/s12870-023-04049-6 · External reference
Identification of R2R3-MYB Transcription Factor Family Based on Amaranthus tricolor Genome and AtrMYB72 Promoting Betalain Biosynthesis by Directly Activating AtrCYP76AD1 Expression
10.3390/plants14030324 · 2025 · External reference
10.1007/s00299-020-02608-x
10.1007/s00299-020-02608-x · External reference
rMVP: A Memory-efficient, Visualization-enhanced, and Parallel-accelerated tool for Genome-Wide Association Study, Genomics
2021 · External reference
A Novel WRKY Transcription Factor HmoWRKY40 Associated with Betalain Biosynthesis in Pitaya (Hylocereus monacanthus) through Regulating HmoCYP76AD1
2020 · External reference
