Contact and support
Need help, have a question, or want to contact the ResearchHub team?
© 2026 ResearchHub. Built for responsible scholarly connection.
Research graph
References from CRISCross: Integration of Epigenetic Information for Deep-Learning-Based Prediction of CRISPR-Cas9 Off-Targets Across Cell Types. Local targets link to admitted publications; unresolved targets remain external evidence.
10.1038/nbt.3659
10.1038/nbt.3659 · External reference
10.1056/nejmoa2107454
10.1056/nejmoa2107454 · External reference
10.1056/nejmoa2405734
10.1056/nejmoa2405734 · External reference
10.1126/science.aba7365
10.1126/science.aba7365 · External reference
10.1038/s41586-022-05140-y
10.1038/s41586-022-05140-y · External reference
10.1038/mtna.2015.37
10.1038/mtna.2015.37 · External reference
10.1016/j.stem.2021.02.002
10.1016/j.stem.2021.02.002 · External reference
10.1016/j.omtm.2025.101449
10.1016/j.omtm.2025.101449 · External reference
The hidden risks of crispr/cas: structural variations and genome integrity
10.1038/s41467-025-62606-z · 2025 · External reference
10.1038/nbt.3117
10.1038/nbt.3117 · External reference
Crispr off-target detection with discover-seq
10.1038/s41596-020-0309-5 · 2020 · External reference
10.1016/j.ymthe.2024.03.006
10.1016/j.ymthe.2024.03.006 · External reference
Circle-seq: a highly sensitive in vitro screen for genome-wide crispr–cas9 nuclease offtargets
10.1038/nmeth.4278 · 2017 · External reference
10.1038/s41587-020-0555-7
10.1038/s41587-020-0555-7 · External reference
10.1093/bioinformatics/btu048
10.1093/bioinformatics/btu048 · External reference
10.1016/j.isci.2023.108557
10.1016/j.isci.2023.108557 · External reference
10.1016/j.omtn.2025.102636
10.1016/j.omtn.2025.102636 · External reference
Systematic decomposition of sequence determinants governing crispr/cas9 specificity
10.1038/s41467-022-28028-x · 2022 · External reference
10.1186/s13059-018-1534-x
10.1186/s13059-018-1534-x · External reference
10.1186/s13059-018-1459-4
10.1186/s13059-018-1459-4 · External reference
10.1016/j.csbj.2021.03.001 · 2021 · Admitted local publication
10.1186/s12859-020-3395-z
10.1186/s12859-020-3395-z · External reference
10.1016/j.csbj.2022.01.006 · 2022 · Admitted local publication
10.1007/978-3-031-70368-3_6
10.1007/978-3-031-70368-3_6 · External reference
10.1016/j.compbiomed.2024.107932
10.1016/j.compbiomed.2024.107932 · External reference
A versatile crispr/cas9 system off-target prediction tool using language model
10.1038/s42003-025-08275-6 · 2025 · External reference
Benchmarking deep learning methods for predicting crispr/cas9 sgrna on-and off-target activities
10.1093/bib/bbad333 · 2023 · External reference
10.1093/nar/gkad021
10.1093/nar/gkad021 · External reference
10.1101/gr.236620.118
10.1101/gr.236620.118 · External reference
Modulating chromatin accessibility by transactivation and targeting proximal dsgrnas enhances cas9 editing efficiency in vivo
10.1186/s13059-019-1762-8 · 2019 · External reference
10.1016/j.stem.2026.04.014
10.1016/j.stem.2026.04.014 · External reference
10.1101/pdb.prot5448
10.1101/pdb.prot5448 · External reference
10.1002/0471142727.mb2129s109
10.1002/0471142727.mb2129s109 · External reference
10.1038/nrg2641
10.1038/nrg2641 · External reference
10.1038/s41588-022-01102-2
10.1038/s41588-022-01102-2 · External reference
Effective gene expression prediction from sequence by integrating long-range interactions
10.1038/s41592-021-01252-x · 2021 · External reference
10.1038/s41586-025-10014-0
10.1038/s41586-025-10014-0 · External reference
10.1093/nar/gkae1025
10.1093/nar/gkae1025 · External reference
Chromatin accessibility profiling by atac-seq
10.1038/s41596-022-00692-9 · 2022 · External reference
Chromatin accessibility: biological functions, molecular mechanisms and therapeutic application
10.1038/s41392-024-02030-9 · 2024 · External reference
10.1038/s41586-024-08328-6
10.1038/s41586-024-08328-6 · External reference
Unresolved reference
External reference
10.1038/nbt.2647
10.1038/nbt.2647 · External reference
Neftune: Noisy embeddings improve instruction finetuning
2023 · External reference
Predicting crispr-cas9 off-target effects in human primary cells using bidirectional lstm with bert embedding
2025 · External reference
Genome-wide crispr off-target prediction and optimization using rna-dna interaction fingerprints
10.1038/s41467-023-42695-4 · 2023 · External reference
10.5281/zenodo.19728804
10.5281/zenodo.19728804 · External reference