Research graph
References from Reversible fixation of microbial cells for targeted genomics. Local targets link to admitted publications; unresolved targets remain external evidence.
A genomic view of Earth’s biomes
10.1038/s41576-025-00888-1 · 2026 · External reference
Understanding microbial ecology and evolution with single-cell genomics
10.1038/s41576-025-00918-y · 2026 · External reference
10.1038/nature12352
10.1038/nature12352 · External reference
10.1159/000532088
10.1159/000532088 · External reference
10.1016/s0580-9517(01)30046-6
10.1016/s0580-9517(01)30046-6 · External reference
10.1128/aem.68.6.3094-3101.2002
10.1128/aem.68.6.3094-3101.2002 · External reference
10.1093/ismejo/wraf138
10.1093/ismejo/wraf138 · External reference
10.1111/1462-2920.12436
10.1111/1462-2920.12436 · External reference
10.1038/s41579-020-0323-1
10.1038/s41579-020-0323-1 · External reference
10.1016/j.scitotenv.2021.150682
10.1016/j.scitotenv.2021.150682 · External reference
10.1038/ismej.2014.92
10.1038/ismej.2014.92 · External reference
10.1016/j.jip.2007.09.009.
10.1016/j.jip.2007.09.009. · External reference
Unresolved reference
External reference
10.1006/mcpr.1994.1065
10.1006/mcpr.1994.1065 · External reference
10.1038/nchem.2307
10.1038/nchem.2307 · External reference
10.1002/cbic.201700625
10.1002/cbic.201700625 · External reference
10.1186/s13059-024-03219-5
10.1186/s13059-024-03219-5 · External reference
10.1093/nar/gnh185
10.1093/nar/gnh185 · External reference
10.1128/aem.56.6.1919-1925.1990
10.1128/aem.56.6.1919-1925.1990 · External reference
10.1016/s0723-2020(99)80065-4
10.1016/s0723-2020(99)80065-4 · External reference
10.1016/j.femsec.2004.06.015
10.1016/j.femsec.2004.06.015 · External reference
10.1128/aem.68.2.661-667.2002
10.1128/aem.68.2.661-667.2002 · External reference
10.1016/s0723-2020(99)80053-8
10.1016/s0723-2020(99)80053-8 · External reference
10.1016/s0723-2020(11)80121-9
10.1016/s0723-2020(11)80121-9 · External reference
Community analysis of the bacterial assemblages in the winter cover and pelagic layers of a high mountain lake by in situ hybridization
10.1128/aem.62.6.2138-2144.1996 · 1996 · External reference
10.1099/ijs.0.2008/004580-0
10.1099/ijs.0.2008/004580-0 · External reference
10.1101/2023.02.02.526759
10.1101/2023.02.02.526759 · External reference
10.1016/j.isci.2021.102348
10.1016/j.isci.2021.102348 · External reference
10.1038/s41467-019-10542-0
10.1038/s41467-019-10542-0 · External reference
10.3389/fmicb.2021.763971
10.3389/fmicb.2021.763971 · External reference
10.1016/j.watres.2021.117696
10.1016/j.watres.2021.117696 · External reference
10.3389/fmicb.2020.585428
10.3389/fmicb.2020.585428 · External reference
10.1073/pnas.1603757113
10.1073/pnas.1603757113 · External reference
10.1038/s41396-020-00749-1
10.1038/s41396-020-00749-1 · External reference
10.1007/s00253-010-2838-2
10.1007/s00253-010-2838-2 · External reference
10.1007/s12223-021-00866-0
10.1007/s12223-021-00866-0 · External reference
Acarbose redirects gut microbiome utilization of dietary carbohydrates to suppress anaphylaxis in mice
10.1038/s41564-026-02350-2 · 2026 · External reference
10.1038/s41396-021-00968-0
10.1038/s41396-021-00968-0 · External reference
10.1078/0723-2020-00015
10.1078/0723-2020-00015 · External reference
10.1078/072320203322337399
10.1078/072320203322337399 · External reference
The Parkinson’s disease drug entacapone disrupts gut microbiome homoeostasis via iron sequestration
10.1038/s41564-024-01853-0 · 2024 · External reference
10.1128/aem.64.9.3336-3345.1998
10.1128/aem.64.9.3336-3345.1998 · External reference
10.1038/nbt.3893
10.1038/nbt.3893 · External reference
10.1016/j.mimet.2007.10.006
10.1016/j.mimet.2007.10.006 · External reference
10.1038/s41467-025-59229-9
10.1038/s41467-025-59229-9 · External reference
Complete genome sequences of three Phocaeicola vulgatus strains isolated from a healthy Japanese individual
10.1128/mra.01124-21 · 2022 · External reference
10.1016/j.cell.2024.01.039
10.1016/j.cell.2024.01.039 · External reference
10.1038/s41587-020-00774-7pmid-33349699
10.1038/s41587-020-00774-7pmid-33349699 · External reference
10.1016/j.cell.2021.01.029
10.1016/j.cell.2021.01.029 · External reference
10.3390/biom13040584
10.3390/biom13040584 · External reference
Single-cell transcriptomics across 2,534 microbial species reveals functional heterogeneity in the rumen microbiome
10.1038/s41564-024-01723-9 · 2024 · External reference
10.1126/science.aba5257
10.1126/science.aba5257 · External reference
10.1073/pnas.0711303105
10.1073/pnas.0711303105 · External reference
10.1038/s41467-019-12413-0
10.1038/s41467-019-12413-0 · External reference
10.1111/tpj.12442
10.1111/tpj.12442 · External reference
10.1101/pdb.prot5366
10.1101/pdb.prot5366 · External reference
10.1111/j.1462-2920.2005.00880.x
10.1111/j.1462-2920.2005.00880.x · External reference
Genomic insights into diverse bacterial taxa that degrade extracellular DNA in marine sediments
10.1038/s41564-021-00917-9 · 2021 · External reference
10.1038/nmeth.1452
10.1038/nmeth.1452 · External reference
10.1038/nature05741
10.1038/nature05741 · External reference
Suspended microchannel resonators with piezoresistive sensors
10.1039/c0lc00447b · 2011 · External reference
10.1038/ismej.2016.161
10.1038/ismej.2016.161 · External reference
10.1007/8623_2015_61
10.1007/8623_2015_61 · External reference
10.3389/fmicb.2021.669776
10.3389/fmicb.2021.669776 · External reference
10.1038/nmeth.3869
10.1038/nmeth.3869 · External reference
The effect of low-abundance OTU filtering methods on the reliability and variability of microbial composition assessed by 16S rRNA amplicon sequencing
10.3389/fcimb.2023.1165295 · 2023 · External reference
10.1128/aem.02456-09
10.1128/aem.02456-09 · External reference
10.1016/j.mimet.2010.02.007
10.1016/j.mimet.2010.02.007 · External reference
10.1093/gigascience/giab008
10.1093/gigascience/giab008 · External reference
10.1093/bioinformatics/btw354
10.1093/bioinformatics/btw354 · External reference
Unresolved reference
External reference
10.1002/cpbi.102
10.1002/cpbi.102 · External reference
10.7717/peerj.7359
10.7717/peerj.7359 · External reference
10.1093/bioinformatics/btp352
10.1093/bioinformatics/btp352 · External reference
10.1038/ismej.2017.126
10.1038/ismej.2017.126 · External reference
10.1093/bioinformatics/btz848
10.1093/bioinformatics/btz848 · External reference
10.1093/bioinformatics/btaf147
10.1093/bioinformatics/btaf147 · External reference
10.64898/2026.03.31.715630
10.64898/2026.03.31.715630 · External reference
10.5281/zenodo.10158086
10.5281/zenodo.10158086 · External reference
10.1093/bioinformatics/btv638
10.1093/bioinformatics/btv638 · External reference
10.1038/nmeth.3103
10.1038/nmeth.3103 · External reference
10.1038/s41587-020-00777-4
10.1038/s41587-020-00777-4 · External reference
10.1093/bioinformatics/btad209
10.1093/bioinformatics/btad209 · External reference
10.5281/zenodo.12753160
10.5281/zenodo.12753160 · External reference
Recovery of genomes from metagenomes via a dereplication, aggregation and scoring strategy
10.1038/s41564-018-0171-1 · 2018 · External reference
10.1038/s41592-023-01940-w
10.1038/s41592-023-01940-w · External reference
10.1093/bioinformatics/btac672
10.1093/bioinformatics/btac672 · External reference
10.1038/s41587-023-01953-y
10.1038/s41587-023-01953-y · External reference
