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References from Seafloor topography structures subseafloor microbial communities in the Puerto Rico Trench. Local targets link to admitted publications; unresolved targets remain external evidence.
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10.1016/j.tree.2009.09.009 · External reference
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10.1073/pnas.1421816112 · External reference
The hadal biosphere: Recent insights and new directions
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Geology, environment, and life in the deepest part of the world’s oceans
2021 · External reference
Organic carbon sources, transport, and mineralization in Kermadec Trench sediments
10.3389/fmars.2025.1661587 · 2025 · External reference
10.1038/ngeo1773
10.1038/ngeo1773 · External reference
10.1038/s43247-020-00087-2 · 2021 · Admitted local publication
Sediment Accumulation and Carbon Burial in Four Hadal Trench Systems
10.1029/2022jg006814 · 2022 · External reference
Spatial variability of prokaryotic and viral abundances in the Kermadec and Atacama Trench regions
10.1002/lno.11711 · 2021 · External reference
The benthic environment of the Aleutian Trench region: Sediment provenance, organic carbon sources and deposition dynamics
10.1016/j.pocean.2025.103627 · 2026 · External reference
Distribution, Source, and Burial of Sedimentary Organic Carbon in Kermadec and Atacama Trenches
10.1029/2020jg006189 · 2021 · External reference
10.1016/j.tim.2024.07.004
10.1016/j.tim.2024.07.004 · External reference
10.1038/s41396-019-0564-z
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Microbial Community Diversity Within Sediments from Two Geographically Separated Hadal Trenches
10.3389/fmicb.2019.00347 · 2019 · External reference
Microbial community structure in hadal sediments: high similarity along trench axes and strong changes along redox gradients
10.1038/s41396-021-01021-w · 2021 · External reference
Uniform selective pressures within redox zones drive gradual changes in microbial community composition in hadal sediments
10.1111/1462-2920.16377 · 2023 · External reference
10.1016/j.cell.2024.12.036
10.1016/j.cell.2024.12.036 · External reference
10.1371/journal.pone.0148016
10.1371/journal.pone.0148016 · External reference
10.1371/journal.pone.0072779
10.1371/journal.pone.0072779 · External reference
Spatial variation and metabolic diversity of microbial communities in the surface sediments of the Mariana Trench
10.3389/fmicb.2022.1051999 · 2022 · External reference
10.1038/s41467-022-29144-4
10.1038/s41467-022-29144-4 · External reference
Clear niche partitioning of nitrite-oxidizing bacteria from the bottom and the slope of Mariana Trench
10.1186/s40168-025-02192-w · 2025 · External reference
10.1016/j.chom.2026.06.015
10.1016/j.chom.2026.06.015 · External reference
10.1126/science.1219424
10.1126/science.1219424 · External reference
10.1038/s41579-018-0046-8
10.1038/s41579-018-0046-8 · External reference
Vertical motions of the Puerto Rico Trench and Puerto Rico and their cause
10.1029/2004jb003459 · 2005 · External reference
Unresolved reference
External reference
Combined effects of osmotic and hydrostatic pressure on multilamellar lipid membranes in the presence of PEG and trehalose
10.1039/c8sm01343h · 2018 · External reference
10.1111/1462-2920.15656
10.1111/1462-2920.15656 · External reference
10.3389/fmicb.2015.00599
10.3389/fmicb.2015.00599 · External reference
10.1073/pnas.1919139117
10.1073/pnas.1919139117 · External reference
10.1038/ngeo2387
10.1038/ngeo2387 · External reference
10.1038/s41467-019-11450-z
10.1038/s41467-019-11450-z · External reference
10.7717/peerj.6961
10.7717/peerj.6961 · External reference
Microbial Selection and Survival in Subseafloor Sediment
10.3389/fmicb.2019.00956 · 2019 · External reference
10.1073/pnas.1614190114
10.1073/pnas.1614190114 · External reference
10.1038/ismej.2015.175
10.1038/ismej.2015.175 · External reference
10.1073/pnas.1402028111
10.1073/pnas.1402028111 · External reference
10.1038/s41396-023-01467-0
10.1038/s41396-023-01467-0 · External reference
Core Metabolic Features and Hot Origin of Bathyarchaeota
10.1016/j.eng.2019.01.011 · 2019 · External reference
10.1126/sciadv.adf5069
10.1126/sciadv.adf5069 · External reference
10.1186/s40168-022-01263-6
10.1186/s40168-022-01263-6 · External reference
Metabolic features that select for Bathyarchaeia in modern ferruginous lacustrine subsurface sediments
10.1093/ismeco/ycae112 · 2024 · External reference
10.1093/femsec/fiaa223
10.1093/femsec/fiaa223 · External reference
10.1016/0009-2541(94)90059-0
10.1016/0009-2541(94)90059-0 · External reference
10.1038/ismej.2015.97
10.1038/ismej.2015.97 · External reference
10.1128/mbio.01937-20
10.1128/mbio.01937-20 · External reference
10.1073/pnas.0811793106
10.1073/pnas.0811793106 · External reference
Oxygen penetration deep into the sediment of the South Pacific gyre
10.5194/bg-6-1467-2009 · 2009 · External reference
Seasonal iron fluxes and iron cycling in sandy bioirrigated sediments
10.3389/fmars.2023.1293893 · 2023 · External reference
10.1073/pnas.2402689121
10.1073/pnas.2402689121 · External reference
10.1111/1462-2920.16359
10.1111/1462-2920.16359 · External reference
10.1128/msystems.00009-15.
10.1128/msystems.00009-15. · External reference
Gu, fastp: an ultra-fast all-in-one FASTQ preprocessor
2018 · External reference
10.1093/bioinformatics/btu170
10.1093/bioinformatics/btu170 · External reference
10.1093/bioinformatics/btq461
10.1093/bioinformatics/btq461 · External reference
10.7717/peerj.2584
10.7717/peerj.2584 · External reference
10.1038/s41587-019-0209-9
10.1038/s41587-019-0209-9 · External reference
10.1371/journal.pone.0009490
10.1371/journal.pone.0009490 · External reference
10.1371/journal.pone.0061217
10.1371/journal.pone.0061217 · External reference
Unresolved reference
External reference
10.1186/s13059-014-0550-8
10.1186/s13059-014-0550-8 · External reference
10.1093/bioinformatics/btv033
10.1093/bioinformatics/btv033 · External reference
10.7717/peerj.7359
10.7717/peerj.7359 · External reference
MaxBin 2.0: an automated binning algorithm to recover genomes from multiple metagenomic datasets
2016 · External reference
Recovery of genomes from metagenomes via a dereplication, aggregation and scoring strategy
10.1038/s41564-018-0171-1 · 2018 · External reference
10.1101/gr.186072.114
10.1101/gr.186072.114 · External reference
GTDB-Tk: a toolkit to classify genomes with the Genome Taxonomy Database
2019 · External reference
10.1038/ismej.2017.126
10.1038/ismej.2017.126 · External reference
10.1093/bioinformatics/btaf147
10.1093/bioinformatics/btaf147 · External reference
Community-led, integrated, reproducible multi-omics with anvi’o
10.1038/s41564-020-00834-3 · 2020 · External reference
10.1093/bioinformatics/bts429
10.1093/bioinformatics/bts429 · External reference
10.1038/nbt.3988
10.1038/nbt.3988 · External reference
10.1101/2021.06.03.446934
10.1101/2021.06.03.446934 · External reference
10.1111/1462-2920.14806
10.1111/1462-2920.14806 · External reference
10.1111/1462-2920.14011
10.1111/1462-2920.14011 · External reference
10.1111/1462-2920.13173
10.1111/1462-2920.13173 · External reference
Complex heatmap visualization
10.1002/imt2.43 · 2022 · External reference
Unresolved reference
External reference
Water masses in the Atlantic Ocean: characteristics and distributions
10.5194/os-17-463-2021 · 2021 · External reference
