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Nonessential tRNA and rRNA Modifications Impact the Bacterial Response to Sub‐MIC Antibiotic Stress
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RNA Editing in Bacteria: Occurrence, Regulation and Significance
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Sites of Action of Two Ribosomal RNA Methylases Responsible for Resistance to Aminoglycosides
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ResFinder 4.0 for Predictions of Phenotypes From Genotypes
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Fast and Sensitive Protein Alignment Using DIAMOND
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MODOMICS: A Database of RNA Modifications and Related Information. 2023 Update
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Plasmidfinder and In Silico pMLST: Identification and Typing of Plasmid Replicons in Whole‐Genome Sequencing (WGS)
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tRNA‐Mediated Codon‐Biased Translation in Mycobacterial Hypoxic Persistence
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MaxQuant Enables High Peptide Identification Rates, Individualized p.p.b.‐Range Mass Accuracies and Proteome‐Wide Protein Quantification
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A CRISPRi Screen in E. coli Reveals Sequence‐Specific Toxicity of dCas9
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Twelve Years of SAMtools and BCFtools
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Detection of Streptococcus Pyogenes M1Uk in Australia and Characterization of the Mutation Driving Enhanced Expression of Superantigen SpeA
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Native RNA Nanopore Sequencing Reveals Antibiotic‐Induced Loss of rRNA Modifications in the A‐ and P‐Sites
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Widespread Occurrence of N6‐methyladenosine in Bacterial mRNA
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Gene Silencing With CRISPRi in Bacteria and Optimization of dCas9 Expression Levels
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Direct RNA Sequencing on Nanopore Arrays Redefines the Transcriptional Complexity of a Viral Pathogen
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Transcriptome‐Wide Mapping of 5‐Methylcytidine RNA Modifications in Bacteria, Archaea, and Yeast Reveals m5C Within Archaeal mRNAs
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Direct Nanopore Sequencing for the 17 RNA Modification Types in 36 Locations in the E. coli Ribosome Enables Monitoring of Stress‐Dependent Changes
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Highly Parallel Direct RNA Sequencing on an Array of Nanopores
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tRNA Modifications Regulate Translation During Cellular Stress
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Enhanced Detection of RNA Modifications in Escherichia coli Utilizing Direct Rna Sequencing
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Indigenous and Acquired Modifications in the Aminoglycoside Binding Sites of ≪I≫Pseudomonas Aeruginosa≪/I≫ rRNAs
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Proteomic Analysis of Human Plasma During Intermittent Fasting
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Accurate and Fast Graph‐Based Pangenome Annotation and Clustering With ggCaller
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Complete Genomic and Transcriptional Landscape Analysis Using Third‐Generation Sequencing: A Case Study of Saccharomyces Cerevisiae CEN.PK113‐7D
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Improved RNA Stability Estimation Through Bayesian Modeling Reveals Most Salmonella Transcripts Have Subminute Half‐Lives
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Direct RNA Sequencing of the Coding Complete Influenza A Virus Genome
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Minimal, Encapsulated Proteomic‐Sample Processing Applied to Copy‐Number Estimation in Eukaryotic Cells
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RNA Modifications Detection by Comparative Nanopore Direct RNA Sequencing
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Minimap2: Pairwise Alignment for Nucleotide Sequences
10.1093/bioinformatics/bty191 · 2018
Epitranscriptome Sequencing Technologies: Decoding RNA Modifications
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Aminoglycoside Resistance 16S rRNA Methyltransferases Block Endogenous Methylation, Affect Translation Efficiency and Fitness of the Host
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Accurate Detection of m6A RNA Modifications in Native RNA Sequences
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The Cfr rRNA Methyltransferase Confers Resistance to Phenicols, Lincosamides, Oxazolidinones, Pleuromutilins, and Streptogramin A Antibiotics
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A tRNA Modification With Aminovaleramide Facilitates AUA Decoding in Protein Synthesis
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Third‐Generation Sequencing Reveals Extensive Polycistronism and Transcriptional Overlapping in a Baculovirus
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Inactivation of the RluD Pseudouridine Synthase Has Minimal Effects on Growth and Ribosome Function in Wild‐Type Escherichia coli and Salmonella enterica
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The Biogrid Database: A Comprehensive Biomedical Resource of Curated Protein, Genetic, and Chemical Interactions
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Nanopore Direct RNA Sequencing Maps the Complexity of Arabidopsis mRNA Processing and m6A Modification
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