Evaluation of direct and cooperative contributions towards the strength of buried hydrogen bonds and salt bridges 1
10.1006/jmbi.2000.3656 · 2000
Prediction and experimental validation of enzyme substrate specificity in protein structures
2013
Expression and biochemical characterization of a Thermostable branching enzyme from Geobacillus thermoglucosidans
2016
10.1002/jmr.657
10.1002/jmr.657
Calcium ion contribution to thermostability of cyclodextrin glycosyltransferase is closely related to calcium-binding site CaIII
10.1021/jf4024273 · 2013
Salt bridges: geometrically specific, designable interactions
10.1002/prot.22927 · 2011
Entrez gene: gene-centered information at NCBI
10.1093/nar/gki031 · 2004
10.1006/jmbi.1998.1904
10.1006/jmbi.1998.1904
10.1016/j.jmb.2006.11.061
10.1016/j.jmb.2006.11.061
Cooperativity of complex salt bridges
10.1110/ps.034975.108 · 2010
Salt bridge stability in monomeric proteins 1 ☆
10.1006/jmbi.1999.3218 · 1999
Close-range electrostatic interactions in proteins
10.1002/1439-7633(20020703)3:7<604::aid-cbic604>3.0.co;2-x · 2015
Crystal structure of full-length Mycobacterium tuberculosis H37Rv glycogen branching enzyme: insights of N-terminal beta-sandwich in substrate specificity and enzymatic activity
10.1074/jbc.m110.121707 · 2010
ClustalW-MPI: ClustalW analysis using distributed and parallel computing
10.1093/bioinformatics/btg192 · 2003
Protein thermal stability enhancement by designing salt bridges: a combined computational and experimental study
10.1371/journal.pone.0112751 · 2014
Nanosilica sol leads to further increase in polyethylene glycol (PEG) 1000-enhanced thermostability of β-cyclodextrin glycosyltransferase from Bacillus circulans
10.1021/jf500322b · 2014
PyETV: a PyMOL evolutionary trace viewer to analyze functional site predictions in protein complexes
10.1093/bioinformatics/btq566 · 2010
UET: a database of evolutionarily-predicted functional determinants of protein sequences that cluster as functional sites in protein structures
10.1093/nar/gkv1279 · 2016
10.1016/s0022-2836(03)00233-x
10.1016/s0022-2836(03)00233-x
PSI-BLAST-ISS: an intermediate sequence search tool for estimation of the position-specific alignment reliability
10.1186/1471-2105-6-185 · 2005
10.1016/j.jmb.2003.12.078
10.1016/j.jmb.2003.12.078
Evolutionary trace report_maker: a new type of service for comparative analysis of proteins
10.1093/bioinformatics/btl157 · 2006
Universally conserved positions in protein folds: reading evolutionary signals about stability, folding kinetics and function
10.1006/jmbi.1999.2911 · 1999
ET viewer: an application for predicting and visualizing functional sites in protein structures
10.1093/bioinformatics/btl285 · 2006
Complex salt bridges in proteins: statistical analysis of structure and function
10.1006/jmbi.1995.0653 · 1995
10.1073/pnas.95.18.10682
10.1073/pnas.95.18.10682
Single nucleotide variations: biological impact and theoretical interpretation
2015
Predicting deleterious amino acid substitutions
10.1101/gr.176601 · 2001
Statistical characterization of salt bridges in proteins
10.1002/prot.20549 · 2010
10.1016/j.jmb.2005.01.027
10.1016/j.jmb.2005.01.027
Evolutionary trace of G protein-coupled receptors reveals clusters of residues that determine global and class-specific functions
10.1074/jbc.m312671200 · 2004
Significant role of electrostatic interactions for stabilization of protein assemblies
10.1016/s0065-227x(97)89630-x · 1997
Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features
2010
Evolutionary trace for prediction and redesign of protein functional sites
10.1007/978-1-61779-465-0_3 · 2012
