Abstract
Jeroen P.M. Vrancken, Jeremy R.H. Tame, Arnout R.D. Voet
Abstract
Authors
Institutions
No ROR-resolved institution is linked to this work yet.
Provenance
crossref
Confidence 100%
pubmed
Confidence 98%
europepmc
Confidence 96%
unpaywall
Confidence 95%
doaj
Confidence 92%
datacite
Confidence 0%
No local reference links have been materialized yet.
No local citing links have been materialized yet.
10.1016/j.sbi.2016.07.003
10.1016/j.sbi.2016.07.003
10.1146/annurev.biophys.29.1.105
10.1146/annurev.biophys.29.1.105
10.1371/journal.pcbi.1006842
10.1371/journal.pcbi.1006842
Scop2 prototype: a new approach to protein structure mining
10.1093/nar/gkt1242 · 2013
The scop database in 2020: expanded classification of representative family and superfamily domains of known protein structures
10.1093/nar/gkz1064 · 2019
10.1073/pnas.93.25.14243
10.1073/pnas.93.25.14243
Engineering of β-propeller protein scaffolds by multiple gene duplication and fusion of an idealized wd repeat
10.1016/j.bioeng.2006.02.002 · 2006
10.1016/j.jmb.2007.12.014
10.1016/j.jmb.2007.12.014
10.1126/science.278.5335.82
10.1126/science.278.5335.82
Osprey: protein design with ensembles, flexibility, and provable algorithms
10.1016/b978-0-12-394292-0.00005-9 · 2013
An evolutionary approach to folding small alpha-helical proteins that uses sequence information and an empirical guiding fitness function
10.1073/pnas.91.10.4436 · 1994
10.1073/pnas.97.19.10383
10.1073/pnas.97.19.10383
The dead-end elimination theorem and its use in protein side-chain positioning
10.1038/356539a0 · 1992
De novo protein design: towards fully automated sequence selection
10.1006/jmbi.1997.1341 · 1997
10.1073/pnas.0900266106
10.1073/pnas.0900266106
10.1073/pnas.1002162107
10.1073/pnas.1002162107
10.1371/journal.pcbi.1002477
10.1371/journal.pcbi.1002477
10.1021/acs.jctc.7b00125
10.1021/acs.jctc.7b00125
10.1126/science.1089427
10.1126/science.1089427
10.1146/annurev-pharmtox-010611-134654
10.1146/annurev-pharmtox-010611-134654
Alpha repeat proteins (αrep) as expression and crystallization helpers
10.1016/j.jsb.2017.08.002 · 2018
Baseline predictors of visual acuity outcome in patients with wet age-related macular degeneration
2018
10.1186/s40942-020-00221-4
10.1186/s40942-020-00221-4
10.1186/s40942-020-00221-4
10.1186/s40942-020-00221-4
10.1007/s40259-020-00429-8
10.1007/s40259-020-00429-8
Computational design of a leucine-rich repeat protein with a predefined geometry
10.1073/pnas.1413638111 · 2014
10.1038/nsmb.2938
10.1038/nsmb.2938
10.1038/nature16191
10.1038/nature16191
10.1038/s41594-020-0397-5
10.1038/s41594-020-0397-5
10.1038/nature16162
10.1038/nature16162
10.1038/s41586-019-1361-6
10.1038/s41586-019-1361-6
Evolution of enzyme function and the development of catalytic efficiency
10.1021/bi00670a032 · 1976
10.1038/255609a0
10.1038/255609a0
Synthesis, purification and initial structural characterization of octarellin, a de novo polypeptide modelled on the α/β-barrel proteins
10.1093/protein/3.4.259 · 1990
Second-generation octarellins: two new de novo (β/α) 8 polypeptides designed for investigating the influence of β-residue packing on the α/β-barrel structure stability
10.1093/protein/8.3.249 · 1995
Octarellin vi: Using rosetta to design a putative artificial (β/α) 8 protein
10.1371/journal.pone.0071858 · 2013
10.1016/j.jsb.2016.05.004
10.1016/j.jsb.2016.05.004
10.1016/s0022-2836(02)01206-8
10.1016/s0022-2836(02)01206-8
Design of symmetric tim barrel proteins from first principles
10.1186/s12858-015-0047-4 · 2015
10.1126/science.289.5484.1546
10.1126/science.289.5484.1546
10.1016/j.copbio.2016.10.015
10.1016/j.copbio.2016.10.015 · doi-reference
10.1038/nchem.2357
10.1038/nchem.2357 · doi-reference
10.1039/c9cc04388h
10.1039/c9cc04388h · doi-reference
10.1073/pnas.1401073111
10.1073/pnas.1401073111 · doi-reference
Design of thermostable beta-propeller phytases with activity over a broad range of phs and their overproduction by Pichia pastoris
10.1128/aem.00253-10 · doi-reference
10.1073/pnas.1905643116
10.1073/pnas.1905643116 · doi-reference
10.1021/bi0610698
10.1021/bi0610698 · doi-reference
10.1126/science.152.3720.363
10.1126/science.152.3720.363 · doi-reference
10.1016/j.cell.2015.12.024
10.1016/j.cell.2015.12.024 · doi-reference
10.1073/pnas.0912616107
10.1073/pnas.0912616107 · doi-reference
10.1016/j.jmb.2006.09.055
10.1016/j.jmb.2006.09.055 · doi-reference
10.1073/pnas.1707642114
10.1073/pnas.1707642114 · doi-reference
10.7554/elife.49853
10.7554/elife.49853 · doi-reference
10.1007/s10601-016-9245-y
10.1007/s10601-016-9245-y · doi-reference
Soft arc consistency revisited
10.1016/j.artint.2010.02.001 · doi-reference
10.1016/j.artint.2014.03.005
10.1016/j.artint.2014.03.005 · doi-reference
10.1107/s205225251801480x
10.1107/s205225251801480x · doi-reference
10.1016/j.cell.2019.01.046
10.1016/j.cell.2019.01.046 · doi-reference
10.1016/j.yjsbx.2020.100027
10.1016/j.yjsbx.2020.100027 · doi-reference
Protein-protein docking with simultaneous optimization of rigid-body displacement and side-chain conformations
10.1016/s0022-2836(03)00670-3 · doi-reference
10.1093/nar/gks498
10.1093/nar/gks498 · doi-reference
10.1073/pnas.1412768111
10.1073/pnas.1412768111 · doi-reference
10.1038/364717a0
10.1038/364717a0 · doi-reference
10.1007/pl00000838
10.1007/pl00000838 · doi-reference
10.1002/prot.21764
10.1002/prot.21764 · doi-reference
β propellers: structural rigidity and functional diversity
10.1016/s0959-440x(99)00035-4 · doi-reference
Computational design of a symmetrical β-trefoil lectin with cancer cell binding activity
10.1038/s41598-017-06332-7 · doi-reference
A lectin from the mussel mytilus galloprovincialis has a highly novel primary structure and induces glycan-mediated cytotoxicity of globotriaosylceramide-expressing lymphoma cells
10.1074/jbc.m112.418012 · doi-reference
10.1016/j.str.2011.10.021
10.1016/j.str.2011.10.021 · doi-reference
Identification of distant homologues of fibroblast growth factors suggests a common ancestor for all β-trefoil proteins
10.1006/jmbi.2000.4087 · doi-reference
10.1073/pnas.1015032108
10.1073/pnas.1015032108 · doi-reference
β-trefoil fold: Patterns of structure and sequence in the kunitz inhibitors interleukins-1β and 1α and fibroblast growth factors
10.1016/0022-2836(92)90668-a · doi-reference
10.1016/j.jmb.2014.11.005
10.1016/j.jmb.2014.11.005 · doi-reference
10.1038/nchembio.1966
10.1038/nchembio.1966 · doi-reference
10.1021/bi802125b
10.1021/bi802125b · doi-reference
10.1016/j.jmb.2008.07.040
10.1016/j.jmb.2008.07.040 · doi-reference
10.1073/pnas.0802202105
10.1073/pnas.0802202105 · doi-reference
Dissection of a (βα) 8-barrel enzyme into two folded halves
10.1038/83021 · doi-reference