Compositional control of aging kinetics in tdp-43 condensates
10.1103/w7g3-6rsd · doi-reference
Biophysical experiments and biomolecular simulations: a perfect match?
10.1126/science.aat4010 · doi-reference
Histone h3 tail charge patterns govern nucleosome condensate formation and dynamics
10.1093/nar/gkag050 · doi-reference
Differential interactions determine anisotropies at interfaces of rna-based biomolecular condensates
10.1038/s41467-025-58736-z · doi-reference
Chromatin network retards nucleoli coalescence
10.1038/s41467-021-27123-9 · doi-reference
Principles of assembly and regulation of condensates of polycomb repressive complex 1 through phase separation
10.1016/j.celrep.2023.113136 · doi-reference
Hp1-driven phase separation recapitulates the thermodynamics and kinetics of heterochromatin condensate formation
10.1073/pnas.2211855120 · doi-reference
Hp1 reshapes nucleosome core to promote phase separation of heterochromatin
10.1038/s41586-019-1669-2 · doi-reference
Phase separation and inheritance of repressive chromatin domains
10.1016/j.gde.2024.102201 · doi-reference
Heterogeneous condensates of transcription factors in embryonic stem cells: molecular simulations
10.1016/j.bpj.2025.04.001 · doi-reference
Transcriptional condensates encode a “golden mean” to optimize enhancer–promoter communication across genomic distances
10.1073/pnas.2513371122 · doi-reference
Nonspecific bridging-induced attraction drives clustering of dna-binding proteins and genome organization
10.1073/pnas.1302950110 · doi-reference
Regulation of chromatin architecture by protein binding: insights from molecular modeling
10.1007/s12551-024-01195-5 · doi-reference
Histone modifications regulate chromatin compartmentalization by contributing to a phase separation mechanism
10.1016/j.molcel.2019.08.019 · doi-reference
Implicit solvent with explicit ions generalized born model in molecular dynamics: application to dna
10.1021/acs.jctc.4c00833 · doi-reference
Cg modeling of nucleosome arrays reveals the salt-dependent chromatin fiber conformational variability
10.1063/5.0242509 · doi-reference
Accelerated simulations reveal physicochemical factors governing stability and composition of rna clusters
10.1021/acs.jctc.4c00803 · doi-reference
Condensates in rna repeat sequences are heterogeneously organized and exhibit reptation dynamics
10.1038/s41557-022-00934-z · doi-reference
Protein structural transitions critically transform the network connectivity and viscoelasticity of rna-binding protein condensates but rna can prevent it
10.1038/s41467-022-32874-0 · doi-reference
Salt dependent phase behavior of intrinsically disordered proteins from a coarse-grained model with explicit water and ions
10.1063/5.0062687 · doi-reference
Coarse-grained model of disordered rna for simulations of biomolecular condensates
10.1021/acs.jctc.4c01646 · doi-reference
A coarse-grained model for disordered and multi-domain proteins
10.1002/pro.5172 · doi-reference
Rna length has a non-trivial effect in the stability of biomolecular condensates formed by rna-binding proteins
10.1371/journal.pcbi.1009810 · doi-reference
Surfactants or scaffolds? Rnas of varying lengths control the thermodynamic stability of condensates differently
10.1016/j.bpj.2023.03.006 · doi-reference
Accurate model of liquid–liquid phase behavior of intrinsically disordered proteins from optimization of single-chain properties
10.1073/pnas.2111696118 · doi-reference
Molecular drivers of rna phase separation
10.1073/pnas.2511348122 · doi-reference
Extreme dynamics in a biomolecular condensate
10.1038/s41586-023-06329-5 · doi-reference
Crossover in aromatic amino acid interaction strength between tyrosine and phenylalanine in biomolecular condensates
10.7554/elife.104950 · doi-reference
Uncovering differences in hydration free energies and structures for model compound mimics of charged side chains of amino acids
10.1021/acs.jpcb.1c01073 · doi-reference
Arginine multivalency stabilizes protein/rna condensates
10.1002/pro.4109 · doi-reference
Current practices in the study of biomolecular condensates: a community comment
10.1038/s41467-025-62055-8 · doi-reference
Chromatin organization drives the search mechanism of nuclear factors
10.1038/s41467-023-42133-5 · doi-reference
Energy-driven genome regulation by ATP-dependent chromatin remodellers
10.1038/s41580-023-00683-y · doi-reference
Breaths, twists, and turns of atomistic nucleosomes
10.1016/j.jmb.2020.166744 · doi-reference
Accurate prediction of thermoresponsive phase behavior of disordered proteins
10.1002/pro.70284 · doi-reference
Multiscale modeling reveals the ion-mediated phase separation of nucleosome core particles
10.1016/j.bpj.2023.10.030 · doi-reference
Sequence determinants of protein phase behavior from a coarse-grained model
10.1371/journal.pcbi.1005941 · doi-reference
Functional partitioning of transcriptional regulators by patterned charge blocks
10.1016/j.cell.2022.12.013 · doi-reference
Transcription regulates the spatio-temporal dynamics of genes through micro-compartmentalization
10.1038/s41467-024-49727-7 · doi-reference
Two independent modes of chromatin organization revealed by cohesin removal
10.1038/nature24281 · doi-reference
