Abstract
Joanne S Griffin, Ewan Harney, Charlton Capes, Rowan Connell, Andrea J. Betancourt, Valèria Romero‐Soriano
Abstract
Authors
Institutions
Provenance
crossref
Confidence 100%
pubmed
Confidence 98%
europepmc
Confidence 96%
openalex
Confidence 95%
unpaywall
Confidence 95%
datacite
Confidence 0%
No local reference links have been materialized yet.
No local citing links have been materialized yet.
10.18129/b9.bioc.topgo
10.18129/b9.bioc.topgo · 2026
Improved scoring of functional groups from gene expression data by decorrelating GO graph structure
10.1093/bioinformatics/btl140 · 2006
A heterochromatin-dependent transcription machinery drives piRNA expression
10.1038/nature23482 · 2017
10.1007/978-1-4939-0931-5_12
10.1007/978-1-4939-0931-5_12 · 2014
Double-stranded RNA-mediated silencing of genomic tandem repeats and transposable elements in the D. melanogaster germline
10.1016/s0960-9822(01)00299-8 · 2001
Dissection of a natural RNA silencing process in the Drosophila melanogaster germ line
10.1128/mcb.24.15.6742-6750.2004 · 2004
The Piwi-piRNA pathway provides an adaptive defense in the transposon arms race
10.1126/science.1146484 · 2007
Widespread evidence for horizontal transfer of transposable elements across Drosophila genomes
10.1186/gb-2009-10-2-r22 · 2009
Causes and consequences of varying transposable element activity: an evolutionary perspective
10.1146/annurev-genom-120822-105708 · 2024
A brief history of the status of transposable elements: from junk DNA to major players in evolution
10.1534/genetics.110.124180 · 2010
Localization of P elements, copy number regulation, and cytotype determination in Drosophila melanogaster
10.1017/s0016672300028822 · 1990
Wake up of transposable elements following Drosophila simulans worldwide colonization
10.1093/oxfordjournals.molbev.a026215 · 1999
The molecular basis of PM hybrid dysgenesis: the role of the P element, a P-strain-specific transposon family
10.1016/0092-8674(82)90463-9 · 1982
Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila
10.1016/j.cell.2007.01.043 · 2007
The Drosophila Y chromosome affects heterochromatin integrity genome-wide
10.1093/molbev/msaa082 · 2020
Transposons, genome size, and evolutionary insights in animals
10.1159/000444429 · 2015
Sex-ratio meiotic drive in Drosophila simulans is related to equational nondisjunction of the Y chromosome
10.1093/genetics/154.1.229 · 2000
Evolution of genome structure in the Drosophila simulans species complex
10.1101/gr.263442.120 · 2021
piRNA-mediated gene regulation and adaptation to sex-specific transposon expression in D. melanogaster male germline
10.1101/gad.345041.120 · 2021
Genomic imprinting absent in Drosophila melanogaster adult females
10.1016/j.celrep.2012.06.013 · 2012
Meiotic drive mechanisms: lessons from Drosophila. 2019. Meiotic drive mechanisms: lessons from Drosophila
10.1098/rspb.2019.1430 · 2019
A transcriptome-wide RNAi screen in the Drosophila ovary reveals factors of the germline piRNA pathway
10.1016/j.molcel.2013.04.007 · 2013
Evidence for horizontal transmission of the P transposable element between Drosophila species
10.1093/genetics/124.2.339 · 1990
STAR: ultrafast universal RNA-seq aligner
10.1093/bioinformatics/bts635 · 2013
Closely related species of Drosophila can contain different libraries of middle repetitive DNA sequences
10.1007/bf00327329 · 1983
HYBRID DYSGENESIS IN DROSOPHILA MELANOGASTER: THE BIOLOGY OF FEMALE AND MALE STERILITY
10.1093/genetics/92.1.161 · 1979
Germ line aberrations associated with a case of hybrid dysgenesis in Drosophila melanogaster males
10.1017/s0016672300018267 · 1979
Hybrid dysgenesis in Drosophila melanogaster: the biology of female and male sterility
10.1093/genetics/92.1.161 · 1979
Fitness landscape of the fission yeast genome Wilke C, editor
10.1093/molbev/msz113 · 2019
Synergy between sequence and size in large-scale genomics
10.1038/nrg1674 · 2005
Hybrid hysgenesis in Drosophila simulans associated with a rapid invasion of the P-element
10.1371/journal.pgen.1005920 · 2016
Spontaneous recombination in Drosophila melanogaster males
10.1073/pnas.68.2.268 · 1971
Unresolved referenced work
2011
Reexamining the P-element invasion of Drosophila melanogaster through the lens of piRNA silencing
10.1534/genetics.115.184119 · 2016
Adaptation to P element transposon invasion in Drosophila melanogaster
10.1016/j.cell.2011.11.042 · 2011
HYBRID DYSGENESIS IN DROSOPHILA MELANOGASTER: A SYNDROME OF ABERRANT TRAITS INCLUDING MUTATION, STERILITY AND MALE RECOMBINATION
10.1093/genetics/86.4.813 · 1977
Evolution of hybrid dysgenesis determinants in Drosophila melanogaster
10.1073/pnas.80.6.1655 · 1983
Hybrid dysgenesis in Drosophila melanogaster: a syndrome of aberrant traits including mutation, sterility and male recombination
10.1093/genetics/86.4.813 · 1977
The recent invasion of natural Drosophila simulans populations by the P-element
10.1073/pnas.1500758112 · 2015
Tempo and mode of transposable element activity in Drosophila
10.1371/journal.pgen.1005406 · 2015
Heterotypic piRNA ping-pong requires qin, a protein with both E3 ligase and tudor domains
10.1016/j.molcel.2011.10.011 · doi-reference
Terminator oligo blocking efficiently eliminates rRNA from Drosophila small RNA sequencing libraries
10.2144/000114102 · doi-reference
A distinct small RNA pathway silences selfish genetic elements in the germline
10.1126/science.1129333 · doi-reference
piRNA-mediated regulation of transposon alternative splicing in the soma and germ line
10.1038/nature25018 · doi-reference
OrthoDB and BUSCO update: annotation of orthologs with wider sampling of genomes
10.1093/nar/gkae987 · doi-reference
P53 is required for female germline stem cell maintenance in P-element hybrid dysgenesis
10.1016/j.ydbio.2017.12.021 · doi-reference
Drosophila P elements preferentially transpose to replication origins
10.1073/pnas.1112960108 · doi-reference
Differential analyses for RNA-seq: transcript-level estimates improve gene-level inferences
10.12688/f1000research.7563.2 · doi-reference
Identification of vulnerable cell types in major brain disorders using single cell transcriptomes and expression weighted cell type enrichment
10.3389/fnins.2016.00016 · doi-reference
piRNA-guided slicing of transposon transcripts enforces their transcriptional silencing via specifying the nuclear piRNA repertoire
10.1101/gad.267252.115 · doi-reference
The piRNA pathway: a fly's perspective on the guardian of the genome
10.1016/j.tig.2010.08.007 · doi-reference
Promiscuous DNA: horizontal transfer of transposable elements and why it matters for eukaryotic evolution
10.1016/j.tree.2010.06.001 · doi-reference
Genomes of historical specimens reveal multiple invasions of LTR retrotransposons in Drosophila melanogaster during the 19th century
10.1073/pnas.2313866121 · doi-reference
Reproductive output of old males is limited by seminal fluid, not sperm number
10.1093/evlett/qrae071 · doi-reference
piRNA and transposon dynamics in Drosophila: a female story
10.1093/gbe/evaa094 · doi-reference
Emergent dynamics of adult stem cell lineages from single nucleus and single cell RNA-Seq of Drosophila testes Buszczak M, Banerjee U, Buszczak M, Nystul TG, editors
10.7554/elife.82201 · doi-reference
BEDTools: a flexible suite of utilities for comparing genomic features
10.1093/bioinformatics/btq033 · doi-reference
The piRNA pathway is developmentally regulated during spermatogenesis in Drosophila
10.1261/rna.055996.116 · doi-reference
Massive horizontal transfer of transposable elements in insects
10.1073/pnas.1621178114 · doi-reference
Salmon provides fast and bias-aware quantification of transcript expression
10.1038/nmeth.4197 · doi-reference
Genome assembly and annotation of a Drosophila simulans strain from Madagascar
10.1111/1755-0998.12297 · doi-reference
FlyBase: updates to the Drosophila genes and genomes database
10.1093/genetics/iyad211 · doi-reference
Myc plays an important role in Drosophila P-M hybrid dysgenesis to eliminate germline cells with genetic damage
10.1038/s42003-020-0923-3 · doi-reference
Gene silencing mechanisms mediated by Aubergine–piRNA complexes in Drosophila male gonad
10.1261/rna.744307 · doi-reference
Biogenesis pathways of piRNAs loaded onto AGO3 in the Drosophila testis
10.1261/rna.2270710 · doi-reference
10.18129/b9.bioc.annotationhub
10.18129/b9.bioc.annotationhub · doi-reference
Non-criss-cross inheritance in Drosophila melanogaster
10.2307/1536473 · doi-reference
The rhino-deadlock-cutoff complex licenses noncanonical transcription of dual-strand piRNA clusters in Drosophila
10.1016/j.cell.2014.04.031 · doi-reference
10.1016/0959-437x(93)90005-a
10.1016/0959-437x(93)90005-a · doi-reference
Cutadapt removes adapter sequences from high-throughput sequencing reads
10.14806/ej.17.1.200 · doi-reference
Effective population size does not explain long-term variation in genome size and transposable element content in animals Castric V, Perry GH, editors
10.7554/elife.100574 · doi-reference
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
10.1186/s13059-014-0550-8 · doi-reference
Minimap2: pairwise alignment for nucleotide sequences
10.1093/bioinformatics/bty191 · doi-reference
Collapse of germline piRNAs in the absence of Argonaute3 reveals somatic piRNAs in flies
10.1016/j.cell.2009.04.027 · doi-reference
TEtools facilitates big data expression analysis of transposable elements and reveals an antagonism between their activity and that of piRNA genes
10.1093/nar/gkw953 · doi-reference
Genome-wide gene expression effects of sex chromosome imprinting in Drosophila
10.1534/g3.113.008029 · doi-reference
Abundant primary piRNAs, endo-siRNAs, and microRNAs in a Drosophila ovary cell line
10.1101/gr.094896.109 · doi-reference
Tissue specificity of Drosophila P element transposition is regulated at the level of mRNA splicing
10.1016/0092-8674(86)90480-0 · doi-reference
The genomic distribution of transposable elements is driven by spatially variable purifying selection
10.1093/nar/gkad635 · doi-reference
Genetic variation in P-element dysgenic sterility is associated with double-strand break repair and alternative splicing of TE transcripts
10.1371/journal.pgen.1010080 · doi-reference