Abstract
Osvaldo Martinez, Silas R. Bergen, Jacob B. Gareis
Abstract
Authors
Institutions
No ROR-resolved institution is linked to this work yet.
Provenance
crossref
Confidence 100%
pubmed
Confidence 98%
europepmc
Confidence 96%
unpaywall
Confidence 95%
doaj
Confidence 92%
datacite
Confidence 0%
No local reference links have been materialized yet.
No local citing links have been materialized yet.
Unresolved referenced work
2005
Unresolved referenced work
Kept as external metadata until matched
Application of Illumina next-generation sequencing to characterize the bacterial community of the Upper Mississippi River
10.1111/jam.12323 · 2013
Landslide hazard zonation mapping using statistical information value method of upper Yamunotri valley in Uttarkashi district, Uttarakhand, India
2021
Assessment of heavy metal pollution in Yamuna River, Delhi-NCR, using heavy metal pollution index and GIS
10.1007/s10661-021-08886-6 · 2021
Metagenomic Analysis Reveals Bacterial and Fungal Diversity and Their Bioremediation Potential From Sediments of River Ganga and Yamuna in India
10.3389/fmicb.2020.556136 · 2020
Metagenome analysis from the sediment of river Ganga and Yamuna: In search of beneficial microbiome
10.1371/journal.pone.0239594 · 2020
Assessment of chemical and microbial contamination in groundwater through leaching of sewage waste in Delhi, India
10.1007/s12665-015-5016-0 · 2016
Community structure and function of microbiomes in polluted stretches of river Yamuna in New Delhi, India, using shotgun metagenomics
10.1007/s11356-022-20766-1 · 2022
A Novel Study on Anionic Surfactant Degradation Potential of Psychrophillic and Psychrotolerant Pseudomonas spp. Identified from Surfactant-contaminated River Water
2023
Ranking the biases: The choice of OTUs vs. ASVs in 16S rRNA amplicon data analysis has stronger effects on diversity measures than rarefaction and OTU identity threshold
10.1371/journal.pone.0264443 · 2022
Integrating terrestrial and aquatic processes toward watershed scale modeling of dissolved organic carbon fluxes
10.1016/j.envpol.2019.03.014 · 2019
Free-Living and Particle-Associated Bacterioplankton in Large Rivers of the Mississippi River Basin Demonstrate Biogeographic Patterns
10.1128/aem.01844-14 · 2014
Influence of particle size on bacterial community structure in aquatic sediments as revealed by 16S rRNA gene sequence analysis
10.1128/aem.00923-08 · 2008
Emerging flavobacterial infections in fish: A review
10.1016/j.jare.2014.10.009 · 2015
Metagenome of a polluted river reveals a reservoir of metabolic and antibiotic resistance genes
10.1186/s40793-019-0345-3 · 2019
Timescales of variation in diversity and production of bacterioplankton assemblages in the Lower Mississippi River
10.1371/journal.pone.0230945 · 2020
Patterns of variation in diversity of the Mississippi river microbiome over 1,300 kilometers
10.1371/journal.pone.0174890 · 2017
Taxonomic profiling and functional gene annotation of microbial communities in sediment of river Ganga at Kanpur, India: insights from whole-genome metagenomics study
10.1007/s11356-022-21644-6 · 2022
Assessing the bacterial diversity and functional profiles of the River Yamuna using Illumina MiSeq sequencing
10.1007/s00203-020-02045-0 · 2021
Ganga River sediments of India predominate with aerobic and chemo-heterotrophic bacteria majorly engaged in the degradation of xenobiotic compounds
10.1007/s11356-022-22198-3 · 2023
Bacterial community structure is indicative of chemical inputs in the Upper Mississippi River
10.3389/fmicb.2014.00524 · 2014
Evaluation of water sampling methodologies for amplicon-based characterization of bacterial community structure
10.1016/j.mimet.2015.05.003 · 2015
Species sorting and seasonal dynamics primarily shape bacterial communities in the Upper Mississippi River
10.1016/j.scitotenv.2014.10.012 · 2015
Sediments and Soils Act as Reservoirs for Taxonomic and Functional Bacterial Diversity in the Upper Mississippi River
10.1007/s00248-016-0729-5 · 2016
Metagenomic study focusing on antibiotic resistance genes from the sediments of River Yamuna
10.1016/j.gene.2020.144951 · 2020
A census of rRNA genes and linked genomic sequences within a soil metagenomic library
10.1128/aem.69.5.2684-2691.2003 · 2003
Earth Microbiome Project and Global Systems Biology
10.1128/msystems.00217-17 · 2018
Organic farming practices utilizing spent microbial biomass from an industrial fermentation facility promote transition to copiotrophic soil communities
10.1007/s10295-020-02318-z · 2020
The ERGO genome analysis and discovery system
10.1093/nar/gkg148 · 2003
Cutadapt removes adapter sequences from high-throughput sequencing reads
2011
DADA2: High-resolution sample inference from Illumina amplicon data
10.1038/nmeth.3869 · 2016
Unresolved referenced work
Kept as external metadata until matched
The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
2013
Proteobacteria: A Common Factor in Human Diseases
10.1155/2017/9351507 · 2017
Gut Bacteroides species in health and disease
10.1080/19490976.2020.1848158 · 2021
Taxonomy, Physiology, and Natural Products of Actinobacteria
10.1128/mmbr.00019-15 · 2016
Bacterioplankton seasonality in deep high-mountain lakes
10.3389/fmicb.2022.935378 · 2022
Habitat generalists and specialists in microbial communities across a terrestrial-freshwater gradient
10.1038/srep37719 · 2016
A guide to the natural history of freshwater lake bacteria
10.1128/mmbr.00028-10 · 2011
The Western English Channel contains a persistent microbial seed bank
10.1038/ismej.2011.162 · doi-reference
Abundance and community of snow bacteria from three glaciers in the Tibetan Plateau
10.1016/s1001-0742(09)60269-2 · doi-reference
Isolation and characterization of fast-growing green snow bacteria from coastal East Antarctica
10.1002/mbo3.1152 · doi-reference
Bacterial diversity in 110 thermal hot springs of Indian Himalayan Region (IHR)
10.1007/s13205-022-03270-8 · doi-reference
10.1007/0-387-30747-8_17
10.1007/0-387-30747-8_17 · doi-reference
Vanadium respiration by Geobacter metallireducens: novel strategy for in situ removal of vanadium from groundwater
10.1128/aem.70.5.3091-3095.2004 · doi-reference
Change in bacterial community structure during in situ biostimulation of subsurface sediment cocontaminated with uranium and nitrate
10.1128/aem.70.8.4911-4920.2004 · doi-reference
Electron Transfer Beyond the Outer Membrane: Putting Electrons to Rest
10.1146/annurev-micro-032221-023725 · doi-reference
Taxonomy, epidemiology, and clinical relevance of the genus Arcobacter
10.1128/cmr.00034-10 · doi-reference
Relevant aspects of Arcobacter spp. as potential foodborne pathogen
10.1016/j.ijfoodmicro.2005.03.003 · doi-reference
Efficacy of wastewater treatment on Arcobacter butzleri density and strain diversity
10.1016/j.watres.2016.09.003 · doi-reference
Arcobacter in Lake Erie beach waters: an emerging gastrointestinal pathogen linked with human-associated fecal contamination
10.1128/aem.08009-11 · doi-reference
Massive microbiological groundwater contamination associated with a waterborne outbreak in Lake Erie, South Bass Island, Ohio
10.1289/ehp.9430 · doi-reference
Arcobacter: an emerging food-borne zoonotic pathogen, its public health concerns and advances in diagnosis and control ‐ a comprehensive review
10.1080/01652176.2017.1323355 · doi-reference
Identification of 16S rRNA and Virulence-Associated Genes of Arcobacter in Water Samples in the Kathmandu Valley, Nepal
10.3390/pathogens8030110 · doi-reference
Search for Campylobacter spp. Reveals High Prevalence and Pronounced Genetic Diversity of Arcobacter butzleri in Floodwater Samples Associated with Hurricane Florence in North Carolina, USA
10.1128/aem.01118-20 · doi-reference
Isolation of Arcobacter butzleri from ground water
10.1046/j.1365-2672.1999.00483.x · doi-reference
Global Distribution and Prevalence of Arcobacter in Food and Water
10.1111/zph.12215 · doi-reference
Isolation and identification of Arcobacter species from environmental and drinking water samples
10.1007/s12223-016-0460-0 · doi-reference
Microdiversification in genome-streamlined ubiquitous freshwater Actinobacteria
10.1038/ismej.2017.156 · doi-reference
The contribution of ’omic’-based approaches to the study of enhanced biological phosphorus removal microbiology
10.1111/j.1574-6941.2009.00698.x · doi-reference
Maximum growth rates and possible life strategies of different bacterioplankton groups in relation to phosphorus availability in a freshwater reservoir
10.1111/j.1462-2920.2006.01053.x · doi-reference