Abstract
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Nafsika Kardomatea, Jolanda Kool, Mioara A. Nicolaie, Harry van Dijken, Emilie Reinen, Prokopis Konstanti, Dirk Eggink, Ryanne Jaarsma, Liesbeth van Emst, Esther van Woudenbergh, José A. Ferreira, Susana Fuentes, Marien I. de Jonge, Jørgen de Jonge, Lilly M. Verhagen, Gerco den Hartog
Abstract
Authors
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Global, regional, and national incidence and mortality burden of non-COVID-19 lower respiratory infections and aetiologies, 1990–2021: a systematic analysis from the Global Burden of Disease Study 2021
10.1016/s1473-3099(24)00176-2 · 2024
Age–sex differences in the global burden of lower respiratory infections and risk factors, 1990–2019: results from the Global Burden of Disease Study 2019
10.1016/s1473-3099(22)00510-2 · 2022
Prevalence of human respiratory pathogens and associated mucosal cytokine levels in young children and adults: a cross-sectional observational study in the Netherlands during the winter of 2012/2013
2024
Mucosal vaccines — fortifying the frontiers
10.1038/s41577-021-00583-2 · 2022
Protective mucosal SARS-CoV-2 antibodies in the majority of the general population in the Netherlands
10.1016/j.mucimm.2024.03.008 · 2024
Prior exposure to B. pertussis shapes the mucosal antibody response to acellular pertussis booster vaccination
10.1038/s41467-022-35165-w · 2022
10.1016/j.vaccine.2021.01.032
10.1016/j.vaccine.2021.01.032 · 2021
Estimating the global and regional burden of lower respiratory infections attributable to leading pathogens and the protective effectiveness of immunization programs
10.1016/j.ijid.2024.107268 · 2024
Institutions
Provenance
crossref
Confidence 100%
ror
Confidence 99%
openalex
Confidence 95%
datacite
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Transmissibility and transmission of respiratory viruses
10.1038/s41579-021-00535-6 · 2021
The mucosal immune system of the upper respiratory tract and recent progress in mucosal vaccines
10.1016/j.anl.2021.07.003 · 2022
Editorial: Immunoregulation at mucosal surfaces
10.3389/fimmu.2022.983201 · 2022
The microbiome: an integral player in immune homeostasis and inflammation in the respiratory tract
10.1152/physrev.00020.2023 · 2024
The mucosal immune system in the oral cavity—an orchestra of T cell diversity
10.1038/ijos.2014.48 · 2014
High burden of viruses and bacterial pathobionts drives heightened nasal innate immunity in children
10.1084/jem.20230911 · 2024
The respiratory microbiome is linked to the severity of RSV infections and the persistence of symptoms in children
2024
Reduced Nasal Viral Load and IFN Responses in Infants with Respiratory Syncytial Virus Bronchiolitis and Respiratory Failure
10.1164/rccm.201712-2567oc · 2018
Chemokine profiling in children and adults with symptomatic and asymptomatic respiratory viral infections
10.1016/j.jinf.2021.10.012 · 2021
Identification of biomarkers for disease severity in nasopharyngeal secretions of infants with upper or lower respiratory tract viral infections
10.1093/cei/uxac083 · 2022
Metatranscriptomics to characterize respiratory virome, microbiome, and host response directly from clinical samples
2021
Laboratory medicine in low-income and middle-income countries: progress and challenges
10.1016/s0140-6736(18)30308-8 · 2018
Absorption of Nasal and Bronchial Fluids: Precision Sampling of the Human Respiratory Mucosa and Laboratory Processing of Samples
10.3791/56413 · 2018
Small-volume detection: platform developments for clinically-relevant applications
10.1186/s12951-021-00852-1 · 2021
Identification of Respiratory Viruses in Asymptomatic Subjects: Asymptomatic Respiratory Viral Infections
10.1097/inf.0b013e31817e695d · 2008
Evaluation of Four Commercial Multiplex Molecular Tests for the Diagnosis of Acute Respiratory Infections
10.1371/journal.pone.0130378 · 2015
Viral detection using a multiplex polymerase chain reaction–based assay in outpatients with upper respiratory infection
10.1016/j.diagmicrobio.2012.10.016 · 2013
Immunoglobulins in Nasal Secretions of Healthy Humans: Structural Integrity of Secretory Immunoglobulin A1 (IgA1) and Occurrence of Neutralizing Antibodies to IgA1 Proteases of Nasal Bacteria
10.1128/cdli.7.1.31-39.2000 · 2000
Immunoglobulin levels in saliva in individuals with selective IgA deficiency: Compensatory IgM secretion and its correlation with HLA and susceptibility to infections
10.1007/bf00918659 · 1989
Secretory IgA: Designed for Anti-Microbial Defense
10.3389/fimmu.2013.00222 · 2013
Possible utilization of salivary IFN-IL-4 ratio as a marker of chronic stress in healthy individuals
10.1002/npr2.12157 · 2021
Effect of age and season on respiratory mucosal immune marker profiles
10.1016/j.jaci.2023.12.009 · 2024
The potential of saliva as an accessible and sensitive sample type for the detection of respiratory pathogens and host immunity
10.1016/s2666-5247(23)00135-0 · 2023
Oral Dysbiosis in Severe Forms of Periodontitis Is Associated With Gut Dysbiosis and Correlated With Salivary Inflammatory Mediators: A Preliminary Study
10.3389/froh.2021.722495 · 2021
Immune Tolerance in the Oral Mucosa
10.3390/ijms222212149 · 2021
The microbiota of the respiratory tract: gatekeeper to respiratory health
10.1038/nrmicro.2017.14 · 2017
Host and environmental factors shape upper airway microbiota and respiratory health across the human lifespan
10.1016/j.cell.2024.07.008 · 2024
Relationships between bacteria and the mucus layer
10.1016/j.carres.2024.109309 · 2024
Diagnostic testing preferences can help inform future public health response efforts: Global insights from an international survey
10.1371/journal.pgph.0003547 · 2024
Accuracy and Acceptance of a Self-Collection Model for Respiratory Tract Infection Diagnostics: A Concise Clinical Literature Review
10.1016/j.jen.2021.04.006 · 2021
Evaluation of 16S rRNA gene sequencing for species and strain-level microbiome analysis
10.1038/s41467-019-13036-1 · 2019
Novel Analysis of Immune Cells from Nasal Microbiopsy Demonstrates Reliable, Reproducible Data for Immune Populations, and Superior Cytokine Detection Compared to Nasal Wash
10.1371/journal.pone.0169805 · 2017
Associations of faecal microbiota with influenza-like illness in participants aged 60 years or older: an observational study
10.1016/s2666-7568(20)30034-9 · doi-reference
Naïve Bayesian Classifier for Rapid Assignment of rRNA Sequences into the New Bacterial Taxonomy
10.1128/aem.00062-07 · doi-reference
Reducing bias in microbiome research: Comparing methods from sample collection to sequencing
10.3389/fmicb.2023.1094800 · doi-reference
Controlling the False Discovery Rate: A Practical and Powerful Approach to Multiple Testing
10.1111/j.2517-6161.1995.tb02031.x · doi-reference
Development and validation of a multiplex immunoassay for the simultaneous determination of serum antibodies to Bordetella pertussis, diphtheria and tetanus
10.1016/j.jim.2008.02.018 · doi-reference
Persistence of Antibodies to Severe Acute Respiratory Syndrome Coronavirus 2 in Relation to Symptoms in a Nationwide Prospective Study
10.1093/cid/ciab172 · doi-reference
Development and Standardization of a High-Throughput Multiplex Immunoassay for the Simultaneous Quantification of Specific Antibodies to Five Respiratory Syncytial Virus Proteins
10.1128/msphere.00236-19 · doi-reference
Multi-Omics Factor Analysis—a framework for unsupervised integration of multi-omics data sets
10.15252/msb.20178124 · doi-reference
Implementing a Class of Permutation Tests: The coin Package
10.18637/jss.v028.i08 · doi-reference
phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data
10.1371/journal.pone.0061217 · doi-reference
Development of a Dual-Index Sequencing Strategy and Curation Pipeline for Analyzing Amplicon Sequence Data on the MiSeq Illumina Sequencing Platform
10.1128/aem.01043-13 · doi-reference
A communal catalogue reveals Earth’s multiscale microbial diversity
10.1038/nature24621 · doi-reference
Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample
10.1073/pnas.1000080107 · doi-reference
Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA
10.1128/aem.59.3.695-700.1993 · doi-reference
The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
10.1093/nar/gks1219 · doi-reference
Novel Analysis of Immune Cells from Nasal Microbiopsy Demonstrates Reliable, Reproducible Data for Immune Populations, and Superior Cytokine Detection Compared to Nasal Wash
10.1371/journal.pone.0169805 · doi-reference
Evaluation of 16S rRNA gene sequencing for species and strain-level microbiome analysis
10.1038/s41467-019-13036-1 · doi-reference
Accuracy and Acceptance of a Self-Collection Model for Respiratory Tract Infection Diagnostics: A Concise Clinical Literature Review
10.1016/j.jen.2021.04.006 · doi-reference
Diagnostic testing preferences can help inform future public health response efforts: Global insights from an international survey
10.1371/journal.pgph.0003547 · doi-reference
Relationships between bacteria and the mucus layer
10.1016/j.carres.2024.109309 · doi-reference
Host and environmental factors shape upper airway microbiota and respiratory health across the human lifespan
10.1016/j.cell.2024.07.008 · doi-reference
The microbiota of the respiratory tract: gatekeeper to respiratory health
10.1038/nrmicro.2017.14 · doi-reference
Immune Tolerance in the Oral Mucosa
10.3390/ijms222212149 · doi-reference
Oral Dysbiosis in Severe Forms of Periodontitis Is Associated With Gut Dysbiosis and Correlated With Salivary Inflammatory Mediators: A Preliminary Study
10.3389/froh.2021.722495 · doi-reference
The potential of saliva as an accessible and sensitive sample type for the detection of respiratory pathogens and host immunity
10.1016/s2666-5247(23)00135-0 · doi-reference
Effect of age and season on respiratory mucosal immune marker profiles
10.1016/j.jaci.2023.12.009 · doi-reference
Possible utilization of salivary IFN-IL-4 ratio as a marker of chronic stress in healthy individuals
10.1002/npr2.12157 · doi-reference
Secretory IgA: Designed for Anti-Microbial Defense
10.3389/fimmu.2013.00222 · doi-reference
Immunoglobulin levels in saliva in individuals with selective IgA deficiency: Compensatory IgM secretion and its correlation with HLA and susceptibility to infections
10.1007/bf00918659 · doi-reference
Immunoglobulins in Nasal Secretions of Healthy Humans: Structural Integrity of Secretory Immunoglobulin A1 (IgA1) and Occurrence of Neutralizing Antibodies to IgA1 Proteases of Nasal Bacteria
10.1128/cdli.7.1.31-39.2000 · doi-reference
Viral detection using a multiplex polymerase chain reaction–based assay in outpatients with upper respiratory infection
10.1016/j.diagmicrobio.2012.10.016 · doi-reference
Evaluation of Four Commercial Multiplex Molecular Tests for the Diagnosis of Acute Respiratory Infections
10.1371/journal.pone.0130378 · doi-reference
Identification of Respiratory Viruses in Asymptomatic Subjects: Asymptomatic Respiratory Viral Infections
10.1097/inf.0b013e31817e695d · doi-reference
Small-volume detection: platform developments for clinically-relevant applications
10.1186/s12951-021-00852-1 · doi-reference
Absorption of Nasal and Bronchial Fluids: Precision Sampling of the Human Respiratory Mucosa and Laboratory Processing of Samples
10.3791/56413 · doi-reference
Laboratory medicine in low-income and middle-income countries: progress and challenges
10.1016/s0140-6736(18)30308-8 · doi-reference
Identification of biomarkers for disease severity in nasopharyngeal secretions of infants with upper or lower respiratory tract viral infections
10.1093/cei/uxac083 · doi-reference
Chemokine profiling in children and adults with symptomatic and asymptomatic respiratory viral infections
10.1016/j.jinf.2021.10.012 · doi-reference
Reduced Nasal Viral Load and IFN Responses in Infants with Respiratory Syncytial Virus Bronchiolitis and Respiratory Failure
10.1164/rccm.201712-2567oc · doi-reference
High burden of viruses and bacterial pathobionts drives heightened nasal innate immunity in children
10.1084/jem.20230911 · doi-reference