Abstract
Mark Wilkinson
Abstract
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Basic Local Alignment Search Tool.
10.1016/s0022-2836(05)80360-2 · 1990
Sensitive protein alignments at tree-of-life scale using DIAMOND.
10.1038/s41592-021-01101-x · 2021
Snail plots are badges of genome assembly quality.
10.1093/g3journal/jkag074 · 2026
BlobToolKit – interactive quality assessment of genome assemblies.
10.1534/g3.119.400908 · 2020
Haplotype-resolved de novo assembly using phased assembly graphs with Hifiasm.
10.1038/s41592-020-01056-5 · 2021
Gfastats: Conversion, evaluation and manipulation of genome sequences using assembly graphs.
10.1093/bioinformatics/btac460 · 2022
Amphibian Species of the World: An online reference.
10.5531/db.vz.0001 · 2026
Identifying and removing haplotypic duplication in primary genome assemblies.
10.1093/bioinformatics/btaa025 · 2020
On the path to reference genomes for all biodiversity: Laboratory protocols and lessons learned from processing over 2,000 species in the Sanger Tree of Life.
10.1093/gigascience/giaf119 · 2025
Significantly improving the quality of genome assemblies through curation.
10.1093/gigascience/giaa153 · 2021
HiGlass: Web-based visual exploration and analysis of genome interaction maps.
10.1186/s13059-018-1486-1 · 2018
Singularity: Scientific containers for mobility of compute.
10.1371/journal.pone.0177459 · 2017
Correlations of geographic distribution and temperature of embryonic development with the nuclear DNA content in the Salamandridae (Urodela, Amphibia).
10.1139/g07-010 · 2007
10.1007/978-1-4757-6781-0_14
10.1007/978-1-4757-6781-0_14 · 1977
BUSCO update: Novel and streamlined workflows along with broader and deeper phylogenetic coverage for scoring of eukaryotic, prokaryotic, and viral genomes.
10.1093/molbev/msab199 · 2021
Phylogenomics yields new systematic and taxonomical insights for Lissotriton newts, a genus with a strong legacy of introgressive hybridization.
10.1016/j.ympev.2024.108282 · 2025
GenomeScope 2.0 and Smudgeplot for reference-free profiling of polyploid genomes.
10.1038/s41467-020-14998-3 · 2020
A 3D map of the human genome at kilobase resolution reveals principles of chromatin looping.
10.1016/j.cell.2014.11.021 · 2014
Towards complete and error-free genome assemblies of all vertebrate species.
10.1038/s41586-021-03451-0 · 2021
Merqury: Reference-free quality, completeness, and phasing assessment for genome assemblies.
10.1186/s13059-020-02134-9 · 2020
A DNA barcoding framework for taxonomic verification in the Darwin Tree of Life Project.
10.12688/wellcomeopenres.21143.1 · 2024
MitoHiFi: A Python pipeline for mitochondrial genome assembly from PacBio high fidelity reads.
10.1186/s12859-023-05385-y · 2023
10.1109/ipdps.2019.00041
10.1109/ipdps.2019.00041 · 2019
The distributions of the six species constituting the smooth newt species complex (Lissotriton vulgaris sensu lato and L. montandoni)–an addition to the New Atlas of Amphibians and Reptiles of Europe.
10.1163/15685381-17000128 · 2018
YaHS: Yet another Hi-C scaffolding tool.
10.1093/bioinformatics/btac808 · 2023
No additional external references are available.